Gene Information

Name : Rahaq2_2841 (Rahaq2_2841)
Accession : YP_005200812.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3061180 - 3062208 bp
Length : 1029 bp
Strand : +
Note : PFAM: FecCD transport family

DNA sequence : 
ATGAGCAGCATGAGCCCTCCGGTGCCGTCACGTCGCCGCTCACCGGTTTGGGCGCTGATTGGCCTCGGCGGCGCGCTGCT
GGTGCTGGCCGTGATGGCAACCAATACCGGTGCGATGTCACTGTCGCTGGGAACGCTGCTCGCACGCCCGTTTGACGACA
GTTTGTGGCAAGTCTGGCTGACAATCCGCCTTCCCCGCGTGTTGCTGGCTGTGATAGTCGGTTGCGCGCTGGCCAGTTCC
GGTGCGGTGATGCAGGGTTTATTTCGTAACCCGCTGGCAGACCCCGGTCTGCTTGGCATTAGCAGCGGCGCGGCGCTGGC
GGTTGCACTGACCATTGTGATGCCGCTGGCATTGCCGCCATTACTGGCCCTTTACAGCCATATGATCAGCGCATTTGTCG
GCAGTCTGGCAATTTCAGCTATCGTCTTTACGCTGAGCCGTTTCGGCCATGGCGGATTATCGCGTTTACTTCTCGCCGGT
ATTGCCATCAATGCGTTGTGCGGGGCTGCTGTCGGCGTGTTGACCTACGTCAGCGATGATCAGCAGCTACGCCAGTTTTC
ACTGTGGAGCATGGGCAGTCTCGGGCAGGCGCAATGGCCTACACTGGCCGTGGCATCTTCGCTGATCCTGCCTGCCTGTA
TTGCGGCGCTGTTTATGGCGCGGCGCCTGAATATTCTGCAATTAGGTGAAGAAGATGCGCACTATCTCGGTGTGAATGTC
CGCCGTACGCAATTGCAATTATTGCTGCTGAGCGCCCTGCTGGTCGGGGCTGCTGTCGCGGTTTCCGGTGTGATTGGCTT
TATCGGTCTGGTGATCCCGCATCTGTTGCGGATGCGTATTGGCGCCGACCACCGCTGGCTCTTACCGGGATCGACCATGG
CGGGCGCCTGCCTGCTTTTGCTGGCTGACACGCTGGCCCGGACCCTGGTTGCTCCGGCAGAAATGCCCGTGGGATTGTTA
ACCAGCCTGATTGGTGGCCCGTATTTCTTATGGCTGATCCTGCGCCCGGGGGTTACGCGTAATGTCTGA

Protein sequence : 
MSSMSPPVPSRRRSPVWALIGLGGALLVLAVMATNTGAMSLSLGTLLARPFDDSLWQVWLTIRLPRVLLAVIVGCALASS
GAVMQGLFRNPLADPGLLGISSGAALAVALTIVMPLALPPLLALYSHMISAFVGSLAISAIVFTLSRFGHGGLSRLLLAG
IAINALCGAAVGVLTYVSDDQQLRQFSLWSMGSLGQAQWPTLAVASSLILPACIAALFMARRLNILQLGEEDAHYLGVNV
RRTQLQLLLLSALLVGAAVAVSGVIGFIGLVIPHLLRMRIGADHRWLLPGSTMAGACLLLLADTLARTLVAPAEMPVGLL
TSLIGGPYFLWLILRPGVTRNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecC AAL08453.1 FecC Virulence SRL Protein 9e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_2841 YP_005200812.1 Fe3+-siderophore ABC transporter permease VFG0922 Protein 3e-72 66
Rahaq2_2841 YP_005200812.1 Fe3+-siderophore ABC transporter permease VFG1044 Protein 5e-18 41
Rahaq2_2841 YP_005200812.1 Fe3+-siderophore ABC transporter permease VFG0926 Protein 3e-17 41