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Name : Rahaq2_2746 (Rahaq2_2746) Accession : YP_005200721.1 Strain : Rahnella aquatilis CIP 78.65 Genome accession: NC_016818 Putative virulence/resistance : Virulence Product : RHS repeat-associated core domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 2932318 - 2935266 bp Length : 2949 bp Strand : - Note : TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) DNA sequence : ATGAAACAGCAAACGAATTTGTACACTCAGACGCCAGATATTGGCGTCTACGATAATCGGGGATTATTAATTCGCGGTTT GCGTTATAACCGGGCCAGTCTGGATGATGCGCTACAGGAACTTATCTCGCAAAACAGCTATACCGATCAGGGTTTTATCA AGCAGAGCACAGATGCGCGGCTCTTTGCCCGTATGCAGCATGGTGAAAGTGTTGTGCCGAATATTACGACGATCTATTCC TTGTCGGGCCAGCCGCTGAAAACGGAAAGCGTCGATGCGGGTAGTTCATGGCAGATGGGAACCTGTGAAGGACACTTTTG TTGGGGGCAAGATAGTGAAGGTAATCAGTGCTGGCATCAGTATGACAACATTGGCCGGCCTGTCATGGTCACCGAGCAGG CAATGGATCAGGCCAGTTGCGTCAGTGAACGGTTCATTTACGGTAGCGATAAATCACTCAATCAAAATAGCAGGCTGATA GCGCATTATGATCCCGCCGGTGTAGAAAAAAACCTTGCCTACATGCTGACCGGACAACCGGCAGGCATCAGCAGGCAACT GCTTGCCGATATGGATACACCGGCAAACTGGGCTGGAGAAGATGAAAGCGCCTGGCAGGTCGCGCTAAACCCGGAAAGTT TTCAGACCAACTGGGACTATGACGCGACGGGCAATACCACCTTGCAAACCGACGCCAGGGGCAATCAGCAACGCTGGGTA TGCAATGTTGCAGGGCAGCTTCAGGAACATTATCTCACGTTAGCAGGAGACACGGAGAAAGTGACTGTCAGTGATATTGA ATATTCCGCTGCCGGTCAGATCCTGCGTGAAACCGCAGGAAATGGTGTGGTTACACAGTATATTTATGAAGCGGAGACTC AGCGTATTACGGGGGTTACCACACTGCGTGGGGACAACACAACGCTGTGTGATCTGCGGTATGAGTACGATCCCGTCGGC AACGTCACCTTTGTCACCGATCTATCTCAAGACGTCAGATTTTACAAAAACCGCCGTGTGACGCCGGATAAAACCTATTC CTACGATGCGTTATACCAGTTGATCAGCGCCAGTGGTCGTCAGAATAATACAATAGTTCACCAAGGCCCTGAGCTTCCCG CCCCGATTGTTGACAGCAGTAATCTTGTTCCCTGGAACCGAAGTTATACCTATGACGCTGCGGGCAACATGACGCAATTC TCACATCTCAGCGAGCAAAATTTTACTCAACAAACGGTTATTGCCACAAATAACAATCGTGCGCTACTGCAAACGGGCGA CGTGAAACCTGAAGATGTTGACGACAGTTTTGACGCAACTGGAAATATATTAATGCTTCAGCCCGGTCAACCCATGATCT GGGATCAGCGTAATGAATTGCAGCAGATTACACTCGTGCAGCGCAGTAATGAGAATGACAGTGACTGGGAGCGTTATTAT TATGCAGGAGGACATCAGCGGATTGCCAAAAAAGCCCAATTAAATAGCGGGCAGAATACACAACAGGTGTTGTATTTACC GGGCATGGAAATACGTTGTACCCGTGCTGGTGAGAATGTCTCAGAACAAATCGTGACAGTGAATATCTCCGCGGGGTCTG CGCAGTTGCGCGTACTGGTCTGGGAAACAGGGGGAGATACCAGCATTACCAGTCCGCAATGGCGTTACAGTCTCGGTAAT CTTATTCGGTCACAAAATATTGAACTTGACGAGGCAGGGAATGTATTAACCATTGAGGAGTATTTTCCATTTGGCGGTAC TGCCGTATGGGCAGGGAATAGCAGCGAAGTAAAATATAAATATGTCCGTTACAGTGGCAAAGAGTTGGATAGAAGCGGAT TATATTATTATGGTCTTCGTTATTATATGCCGTGGTGTTGCCGTTGGGTTAGCGCCGATCCGGGGGGTATTGCCGATGGC CTGAATTTATATTGCATGGTGCATAATAACCCTGTTTCATATCATGATATTGGCGGTATGATCAGTGATGAAGCAAAAAA TGAAATTAAGGGATACGGATGTAAACCTTCACAGGGAAAAAATTCACATTTTATAGTTAAGGATATTGCTGAAGGGTTAA TCCATGTTTCCATTAAAGGAACTAATGAACAATTAAGTCCTTTAGGATTTAAATTTTCCAGGGAAACCAGTGAGCCCAGA ACCATTGAATATCTGGCTATTTCCTCAAAATATTACCGCTCGTCGGTTGTAGGGGGGAGTACAGTAATAAATCCAGTCAC CTCAGCAGGAAAAGATTTGCAAGCCCTGGGTAAGGTCAACGCATTAAATAAAATGACAGTGGTAATCAATGGGGGGTTTT ATAACATGGGTCAAAAGGCAGCAGGAAATGAACCTGAAAACACCCCCATAGGCCCCACTGTGTATAATGGGAATACTCAG GTAAAGTCACTACCCGTTCCTTCCCAATATGCTAATGACTATCATTCACTCTCATTGGGATATCAGAGCAAGTTAAGTAG TGCACCATTATTATCTTCCGGTGGTCAGCCCCGCTTTGAATCTCTCCCGGCGAATGATGCAAATTATAAGTTAAAAAATC CCAGACAGATTCCCGAGCCAGGAACGCTGACCCATGCGGCACATCCTAATCCAAGGGCTGCGATTATTTCAACGAGGAAG ATTGTTGACGAGGGGATGCAGCGGTTGCTGATAGGAAAAAGTACCGGAGAGAGGGGGGCTTTAAGTTCTAACGGCTATAC ATTGTCAGAATGGTCAATGGTAGTGAACAGAATTAACCAGTTAAACCCAATACCAGGTACTGCGCTAAATTTAGATGGCG GTGGGTCTGCTTATATTGGTGTTATTGGTAGCAACGGAGAGAAAATCCTTGAATCCTCTCAGCTAGAGGGAGGGCGAGCC GCTGCGAACTTTATTCGTTTTTCTCATTATCCGCCACAAGCAGGACAGAGTACGTCAACAAGACTGTAA Protein sequence : MKQQTNLYTQTPDIGVYDNRGLLIRGLRYNRASLDDALQELISQNSYTDQGFIKQSTDARLFARMQHGESVVPNITTIYS LSGQPLKTESVDAGSSWQMGTCEGHFCWGQDSEGNQCWHQYDNIGRPVMVTEQAMDQASCVSERFIYGSDKSLNQNSRLI AHYDPAGVEKNLAYMLTGQPAGISRQLLADMDTPANWAGEDESAWQVALNPESFQTNWDYDATGNTTLQTDARGNQQRWV CNVAGQLQEHYLTLAGDTEKVTVSDIEYSAAGQILRETAGNGVVTQYIYEAETQRITGVTTLRGDNTTLCDLRYEYDPVG NVTFVTDLSQDVRFYKNRRVTPDKTYSYDALYQLISASGRQNNTIVHQGPELPAPIVDSSNLVPWNRSYTYDAAGNMTQF SHLSEQNFTQQTVIATNNNRALLQTGDVKPEDVDDSFDATGNILMLQPGQPMIWDQRNELQQITLVQRSNENDSDWERYY YAGGHQRIAKKAQLNSGQNTQQVLYLPGMEIRCTRAGENVSEQIVTVNISAGSAQLRVLVWETGGDTSITSPQWRYSLGN LIRSQNIELDEAGNVLTIEEYFPFGGTAVWAGNSSEVKYKYVRYSGKELDRSGLYYYGLRYYMPWCCRWVSADPGGIADG LNLYCMVHNNPVSYHDIGGMISDEAKNEIKGYGCKPSQGKNSHFIVKDIAEGLIHVSIKGTNEQLSPLGFKFSRETSEPR TIEYLAISSKYYRSSVVGGSTVINPVTSAGKDLQALGKVNALNKMTVVINGGFYNMGQKAAGNEPENTPIGPTVYNGNTQ VKSLPVPSQYANDYHSLSLGYQSKLSSAPLLSSGGQPRFESLPANDANYKLKNPRQIPEPGTLTHAAHPNPRAAIISTRK IVDEGMQRLLIGKSTGERGALSSNGYTLSEWSMVVNRINQLNPIPGTALNLDGGGSAYIGVIGSNGEKILESSQLEGGRA AANFIRFSHYPPQAGQSTSTRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 1e-121 | 44 |
