Gene Information

Name : Rahaq2_0271 (Rahaq2_0271)
Accession : YP_005198358.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : P pilus assembly protein, chaperone PapD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 295039 - 295725 bp
Length : 687 bp
Strand : -
Note : PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain

DNA sequence : 
ATGGGTAAGTCAAAAAAATTAACATTACTCTTCATTATAATTTCTGTATTTACATCACAAATAACCTATGCTGGCGGAAT
TATTGTCGGACGGACACGCGTTATTTATGACGCAGATAAAAGGGAAGCGACCCTTTCCGTTAAAAATAATGCCGATAACA
ATCCTTTCCTCATACAATCGTGGGTTGATGCGGGGGGAGAAAAAACACGCGGTCCTTTTATTATCACCCCGCCACTATTT
CGACTGAATGCTCAACAGGAAAGTAACCTGCGCATTTCCTATAACGGCAGCGCCCTCCCGACAGACAGAGAGTCCGTTTT
CTATATCAATGTTAAAGCGATACCTTCAACGCCTAAAAATACAAAAAACGAACTTAAACTGGTGGTCAATACGCGGATAA
AGCTCTTTTACCGGCCAACAAAACTGCCCGGAAAATCGTTTGAAGCACCGAAGGCGCTCACTTTCTCCAAAAATAACGGT
CATCTCGTTATCAAGAATCAGAGCCCTTATCACGTTGTTTTCAGTTCACTCAGCATTGGCTCAACTTTTTTAAAAGAGGT
GGCCATGATTGCGCCATTGAGCGAGCTGGATGTCATTCTTCCCGCGAAAATCTCAGGCAACAGTGTGAAATGGGAAGCGA
TAAATGACTATGGCGGCACGACAGAACGATATGAGCAACCTCTGTAA

Protein sequence : 
MGKSKKLTLLFIIISVFTSQITYAGGIIVGRTRVIYDADKREATLSVKNNADNNPFLIQSWVDAGGEKTRGPFIITPPLF
RLNAQQESNLRISYNGSALPTDRESVFYINVKAIPSTPKNTKNELKLVVNTRIKLFYRPTKLPGKSFEAPKALTFSKNNG
HLVIKNQSPYHVVFSSLSIGSTFLKEVAMIAPLSELDVILPAKISGNSVKWEAINDYGGTTERYEQPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 6e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_0271 YP_005198358.1 P pilus assembly protein, chaperone PapD VFG0445 Protein 1e-38 41