Gene Information

Name : Rahaq2_2674 (Rahaq2_2674)
Accession : YP_005200660.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2868356 - 2869180 bp
Length : 825 bp
Strand : -
Note : PFAM: Integrase core domain; manually curated

DNA sequence :
ATGTGTGATGCGACCGGTCTGTCGCAACGTCGTGCCTGCAGGCTTACAGGTTTGTCCCTGTCGACCTGCCGTTATGATGC
TCAGCGTCCGGCTGCTGATGCACATTTATCAGGGCGTATTACTGAGCTGGCGCTTGAACGCAGACGTTTTGGTTATCGGC
GTATCTGGCAGTTGCTGCGTAGGGAGGGCCTTCACGTCAATCACAAGCGGGTATACCGTATTTACCACCTTAATGGACTG
AGCGTAAAACGCAGACGACGCCGTAAAGGGCTGGCGACCGAACGGTTTCCGCTTCTTCGCCCGGATGCGCCGAACCTTAC
ATGGTCGATGGATTTCGTTATGGACGCACTGGTCAACGGTCGCAGGATCAAGTGCCTGACCTGTGTGGATGATTTCACGA
AGGAGTGTCTGACGATCACCGCTGCTTTCGGTATTTCAGGCGTTCAGGTCACGCGTATTCTGGACAGCATCGCGTTGTTT
CGGGGCTATCCGGCGACAATAAGAACCGATCAGGGCCCGGAATTTACCTGCCGCGCGCTCGATCAATGGGCCTTTGAGCA
TGGTGTGGAACTACGGCTTATCCAGCCAGGTAAGCCAACGCAGAACGGATTTATTGAGAGTTTTAACGGACGCTTTCGCG
ATGAGTGTCTGAACGAACACTGGTTCAGCGATATCGTTCACGCCAGGAAAACCATTAACGACTGGAGGCAGGATTATAAC
GAGTGTCGTCCACATTCGGCACTGAATTATCTGACGCCATCAGAGTTTGCAGCACGGTGGCGAAATGGAAAATGTGAAGG
TAAACAAACCGACATTACTAACTGA

Protein sequence :
MCDATGLSQRRACRLTGLSLSTCRYDAQRPAADAHLSGRITELALERRRFGYRRIWQLLRREGLHVNHKRVYRIYHLNGL
SVKRRRRRKGLATERFPLLRPDAPNLTWSMDFVMDALVNGRRIKCLTCVDDFTKECLTITAAFGISGVQVTRILDSIALF
RGYPATIRTDQGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDIVHARKTINDWRQDYN
ECRPHSALNYLTPSEFAARWRNGKCEGKQTDITN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 6e-64 65
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-80 62
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 1e-46 60
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-39 45
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-43 44