Gene Information

Name : Rahaq2_0265 (Rahaq2_0265)
Accession : YP_005198352.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : transcriptional accessory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 279694 - 282024 bp
Length : 2331 bp
Strand : -
Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region

DNA sequence :
ATGAATGATCAACTGAGCCGCATTATCGCAAGTGAATTGCAGGTTCGCCCGGAGCAGGTTGCTTCCGTGGTGCGTCTGCT
GGATGAAGGTAATACCGTGCCGTTTATTGCACGGTACCGTAAGGAAGTCACCGGTGGGTTGGATGATACCCAGCTGCGTC
AGTTGGACACCCGTCTGGGTTATCTGCGGGAGCTGGAAGACCGCCGCCAGACCATTCTCAAATCCATTGAGGAGCAGGGA
AAACTCAGCGACGATCTGGCGAAAGCCATTAATACAACGCTGAGCAAAACCGAGCTGGAAGACCTTTACCTGCCGTTTAA
ACCGAAGCGCCGCACCCGCGGACAAATCGCCATTGAAGCCGGACTGGAACCGCTGGCCGAACTGCTGTGGAACGCGCCGC
AAAACGAGCCGGACGCTGCTGCCGCACAATTTGTCGATGCTGAAAAAGGCGTGGCCGACACCAAAGCGGCGCTGGATGGC
GCACGTTACATTCTGATGGAACGCTTTGCAGAAGATGCCTCGCTGCTGGCGAAAGTCCGTGATTATTTATGGAAAAATGC
CCATCTGACCTCCCGCATGGTAGAGGGCAAAGAACAGGAAGGCGCGAAATTCCGCGACTATTTCGATCACCACGAACCCA
TTTCTCAGGTGCCTTCTCACCGCGCACTGGCGATGTTCCGTGGCCGTAACGAAGGCGTGTTACAACTGGCGCTGAATGCC
GATCCGCAACACGATGAACCCCCGAAAGAGAGTTATGCCGAACAGTTGATCATCGACCATCTGGGCCTGCGGCTGAACAA
CGCACCTGCCGACGTATGGCGTCGCGCCGTCGTCAACTGGACATGGCGTATCAAAGTGCTGCTGCACCTCGAAACTGAAC
TGATGGGCACCGTGCGCGAACGCGCCGAAGATGAAGCGATTAACGTTTTCGCCCGCAACATGCACGATTTGCTGATGGCC
GCGCCAGCCGGTATGCGCGCCACGATGGGCCTCGATCCGGGTTTACGTACCGGTGTGAAAGTCGCCGTTGTGGATAACAC
CGGCAAACTGGTGGATATCGATACGGTTTATCCCCATACCGGTCAGGCGGCGAAAGCCGCGCAACAGGTTGCGGCGCTGT
GTATTAAACATAACGTCGAACTGGTGGCGATCGGTAATGGTACCGCGTCCCGTGAAACGGAACGTTTCTTCCTCGAATTG
CAAAAACAGTTCCCGGCGGTAAAAGCGCAGAAAGTGATTGTCAGCGAAGCCGGTGCATCGGTGTATTCCGCCTCCGAACT
GGCGGCGCTGGAATTCCCGGATCTGGATGTGTCCATTCGCGGCGCAGTCTCTATCGCCCGACGCTTGCAGGATCCGCTGG
CGGAACTGGTGAAAATCGACCCGAAATCCATCGGTGTGGGCCAGTATCAGCACGACGTCAGCCAGTCTCAGCTGGCGAAA
AAACTCGATACCGTGGTGGAAGACTGCGTAAACGCCGTCGGCGTGGATCTGAATACCGCGTCTGTTCCGCTGCTGACCCG
TGTGGCCGGTCTGACCCGCATGATGGCGCAGAATATCGTCAACTGGCGCGATGAGAACGGTCAGTTCCGTAACCGCGAAC
AGTTGCTGAAAGTCAGCCGTCTGGGACCAAAAGCCTTTGAGCAATGCGCGGGCTTCCTGCGCATCAATCACGGCGACAAT
CCGCTCGATGCCTCGACGGTTCACCCGGAAACCTATCCGGTAGTGGAACGCATTCTGGCGGCGACACAGATGGCGCTGAA
AGAACTGATGGGCGATTCGAATGTGTTGCGCGGCCTCAAAGCCAGCGAATTCACCGATGAGCAATTCGGTGTGCCGACGG
TCACCGACATTATTAAAGAGCTGGAAAAACCGGGGCACGATCCGCGTCCTGAGTTTAAAACCGCGACCTTCGCCGATGGC
GTGGAAACCATGAACGACCTGATGCCAGGTATGATCCTCGAAGGTTCTGTCACTAACGTCACCAACTTTGGTGCATTCGT
CGATATCGGCGTCCATCAGGACGGTCTGGTGCATATCTCGTCACTGGCGAACAAGTTCGTTGAAGATCCGCATACCGTGG
TGAAAGCCGGTGATATCGTGAAAGTCAAAGTGATGGAAGTCGATCTGCAACGCAAACGTATCGCGCTGACCATGCGACTG
GATGAGCAACCGGGCGAAGCGCCTGCCCGCCGTTCTTCCGCGCCAGCGGCAGATACCCGCGACAACCAGAAACGCCATTC
GCCGAACAAACCGGCGGGCCGCAATACGGTTCCGGCGGGCAATAATGCCATGGCTGATGCACTGGCAGCCGCGCTCGGCA
AAAAACGGTAA

Protein sequence :
MNDQLSRIIASELQVRPEQVASVVRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLDTRLGYLRELEDRRQTILKSIEEQG
KLSDDLAKAINTTLSKTELEDLYLPFKPKRRTRGQIAIEAGLEPLAELLWNAPQNEPDAAAAQFVDAEKGVADTKAALDG
ARYILMERFAEDASLLAKVRDYLWKNAHLTSRMVEGKEQEGAKFRDYFDHHEPISQVPSHRALAMFRGRNEGVLQLALNA
DPQHDEPPKESYAEQLIIDHLGLRLNNAPADVWRRAVVNWTWRIKVLLHLETELMGTVRERAEDEAINVFARNMHDLLMA
APAGMRATMGLDPGLRTGVKVAVVDNTGKLVDIDTVYPHTGQAAKAAQQVAALCIKHNVELVAIGNGTASRETERFFLEL
QKQFPAVKAQKVIVSEAGASVYSASELAALEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDTVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVNWRDENGQFRNREQLLKVSRLGPKAFEQCAGFLRINHGDN
PLDASTVHPETYPVVERILAATQMALKELMGDSNVLRGLKASEFTDEQFGVPTVTDIIKELEKPGHDPRPEFKTATFADG
VETMNDLMPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLANKFVEDPHTVVKAGDIVKVKVMEVDLQRKRIALTMRL
DEQPGEAPARRSSAPAADTRDNQKRHSPNKPAGRNTVPAGNNAMADALAAALGKKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62