Gene Information

Name : Rahaq2_2592 (Rahaq2_2592)
Accession : YP_005200583.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2775319 - 2776638 bp
Length : 1320 bp
Strand : +
Note : PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase

DNA sequence :
ATGCACGCATATTTCGACAAGCTCGACGCAGTTCGCTACGAAGGTGCTAACAGCACTAACCCGCTGGCATTCCGTCATTA
CAACCCTGAAGAAGTGATCCTCGGCAAAACGATGGCTGAGCATCTGCGTTTCGCGGCTTGTTACTGGCACACCTTCTGCT
GGAATGGTAATGACATGTTCGGTGTGGGCGCGTTTGACCGTCCGTGGCAACAACCCGGCGACGCGCTGGCGCTGGCCAAA
AGTAAAGCGGATGTCGCTTTCGAATTCTTCCAGAAACTGAATGTGCCTTATTATTGCTTCCATGATGTGGATGTCTCGCC
GGAAGGCGCATCGCTGAAAGAATATGTGAACAATTTTGCCGTCATGACTGACGTGCTGGCACAAAAACAGGAAGACAGCG
GCGTAAAATTGTTGTGGGGTACAGCTAACTGCTTTACCAATCCACGTTACGGCGCAGGTGCGGCGACCAATCCTAATCCA
GAAATTTATACCTGGGCCGCAACACAGGTTGTGCATGCCATGAATGCCACCAAACAGCTGGGCGGCGAAAACTACGTGCT
GTGGGGTGGCCGTGAAGGCTACGAAACCCTGCTCAATACTGACCTTCGTCAGGAACGCGAACAATTGGGTCGCTTCATGC
AAATGGTCGTTGAGCACAAACATAAAATCGGTTTCCAGGGCACCCTGCTGATCGAACCCAAACCGCAGGAACCGACCAAA
CATCAGTACGATTATGATGTCGCTTCCGTCTATGGCTTCCTGAAACAGTTTGGTCTGGAAAAAGAGATCAAAGTGAATAT
TGAGGCCAATCACGCCACCCTGGCCGGTCACTCATTCCACCATGAAATTGCTAACGCAATTGCTCTCGGTATCTTCGGCT
CTGTGGATGCCAACCGTGGCGACCCGCAATGTGGCTGGGATACCGATCAGTTCCCGAACAGTGTGGAAGAAAATGCGCTG
GTGATGTATGAAATCATCAAAGCGGGCGGGTTCACCACCGGCGGCCTGAATTTTGACTCTAAAGTGCGCCGTCAGAGCAC
CGACAAATACGATCTGTTCTACGGTCATATCGGCGGAATGGACACCATGGCGCTGGCGCTGAAAGTGGCAGCCCGTATGA
TTGAAAGCCGTGAGCTGGATAAACACGTTGCTCAACGTTATGCAGGCTGGAATACCGAGCTGGGTCAGCAAATCCTGCAA
GGTAAAATGTCGCTGGAATCCCTGAGCAACTATGCGCAACAAAATGCGCTGGCGCCTCAGCACCAGAGCGGCCAGCAGGA
GCGTCTGGAGAATCTGGTTAACCGTTATCTGTTTGGTTAA

Protein sequence :
MHAYFDKLDAVRYEGANSTNPLAFRHYNPEEVILGKTMAEHLRFAACYWHTFCWNGNDMFGVGAFDRPWQQPGDALALAK
SKADVAFEFFQKLNVPYYCFHDVDVSPEGASLKEYVNNFAVMTDVLAQKQEDSGVKLLWGTANCFTNPRYGAGAATNPNP
EIYTWAATQVVHAMNATKQLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK
HQYDYDVASVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIANAIALGIFGSVDANRGDPQCGWDTDQFPNSVEENAL
VMYEIIKAGGFTTGGLNFDSKVRRQSTDKYDLFYGHIGGMDTMALALKVAARMIESRELDKHVAQRYAGWNTELGQQILQ
GKMSLESLSNYAQQNALAPQHQSGQQERLENLVNRYLFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 1e-106 50
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 1e-106 50