Gene Information

Name : Rahaq2_2440 (Rahaq2_2440)
Accession : YP_005200432.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2612767 - 2613666 bp
Length : 900 bp
Strand : -
Note : PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain

DNA sequence :
ATGAACCACATCGAACTGCGTCATTTGCGTTATTTCATCACCGTTGCCGAGGAACTGCATTTTGGCCGGGCAGCGGAACG
TCTGCACATTTCCCAGCCGCCGCTGAGCCAGCAAATTCAGGCGCTGGAAATCCATCTGGGGGCCACGCTGTTTTATCGCA
ACAACCGCAGTGTACGGCTGACACAGGCGGGACAGGCTTTTTTGCAGGAAGCCCGGCAGATTTTGCAGCGGGTCGATGAG
GCGTCAGCTCAGGCGGCACGCATTCATCGCGGTGAATCAGGCAATCTGACACTCGGTCTGACTTCTTCAGCGCCGTTTTT
ACGGCGGGTTTCGCGCACCTTACACCGTTTTCGGCTGACCTATCCGGACGTCAATATCCGCATCGAGCAGCTCAACAGCA
AACAGCAGATCGACCCCTTGCTGGAGGGAAAACTGGATCTGGGCATTATGCGCAATGGCGAGTTGCCGGAGGAACTGGAA
CACCATCTCGTACTTTCCGAACCGCTGATTGCCGTGGTGCACAGAGACCATCCGCTGAATGCGCTTAAAGAAGGGGAACT
GACTTTTCAACACCTTGCCGATCAGCCGTTTGTGTTTTTCTCTAAAGATGTCGGCACGTCACTTTACGACGATATTCTCG
GCCAGCTCAAAGCACAGGGGATTACGCCGTACATCACCCAGGAAGTCGGCGAACCGCTGACCATTATCGGGCTGGTCGCG
GCCGGTCTTGGCGTGTCGATTCTGCCCGCTTCCTATTTGCGTATTCAGGTCGAGGGCGTGCGGTATTTACGATTTGGCAG
CCTGCAGGGCACGACAGAACTCTGGCTGGTGAATCACGCCCGGCGACCTGTCACCGCTGCAGCCCGCGCATTTATGGATT
TGTTGTTACACGAAGAATGA

Protein sequence :
MNHIELRHLRYFITVAEELHFGRAAERLHISQPPLSQQIQALEIHLGATLFYRNNRSVRLTQAGQAFLQEARQILQRVDE
ASAQAARIHRGESGNLTLGLTSSAPFLRRVSRTLHRFRLTYPDVNIRIEQLNSKQQIDPLLEGKLDLGIMRNGELPEELE
HHLVLSEPLIAVVHRDHPLNALKEGELTFQHLADQPFVFFSKDVGTSLYDDILGQLKAQGITPYITQEVGEPLTIIGLVA
AGLGVSILPASYLRIQVEGVRYLRFGSLQGTTELWLVNHARRPVTAAARAFMDLLLHEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
stmR AAK97547.1 StmR Not tested SPI-6 Protein 8e-37 42