|
Name : Rahaq2_2425 (Rahaq2_2425) Accession : YP_005200417.1 Strain : Rahnella aquatilis CIP 78.65 Genome accession: NC_016818 Putative virulence/resistance : Unknown Product : ATPase component of various ABC-type transport systems with duplicated ATPase domain Function : - COG functional category : - COG ID : - EC number : - Position : 2592849 - 2594477 bp Length : 1629 bp Strand : - Note : PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region DNA sequence : ATGACGACTGCCAGACCTTTGCTCGACGTTCGCCACCTCGCCATTCATACCGATGCCGGATTACCGCTGGTGAAATCACT TTCCCTGCAGGTGAATCGCCGCGAAATGGTGGCGCTGGTGGGGGAGTCCGGTTCCGGTAAAACGCTGAGTTCGCTGGCGC TGATGGGATTGCTGCCGCCGGGTGTGAGTATGACGGGCGGGGAAATCTGGCTGACCGGTAAATCCATTGCCAGCCCGCAG GGGGCGTTTGATGCCTCTGCGCGGGGTCAACGGCTGGCGATGATTTTTCAGGAACCGATGACCAGTATGAATCCGGTGCT GAAAGTCGGTGAACAGATAGCCGAAGTGCTGGTGCGTCATCAGGGATCGGGCTGGAAACAGGCGCACCGTGAGGCCATCG CTTTGCTGGATCGCGTCGGTATCCAGAATCCGCAGCAACGGGCGAACCAGTATATCCATCAGCTTTCCGGCGGCATGCGC CAGCGGGTCATGATCGCCAGCGCCATCAGTTGTAAGCCTTCGTTGCTGATTGCCGATGAGCCGACCACCGCGCTGGATGT CACCATTCAGGCGCAGATTCTGGCGTTGTTGCTGGAATTACAGCAGGAAATGCAGATGGGCGTGCTGCTGATCACCCATG ACCTGAGCGTGGTGGCGCGTTACGCTGACCGTGCTTACGTGATGCATCAGGGGAGCCTGGTGGAAGAAGGGCCGGTGGCA ACACTGCTGACCGATCCGCAGGAGCCTTACACCCGCAAACTGATTGCCGCTTCCCAGCCTGAACCGCGTCCGGTCAGCGC AGAAATCAGCGCGATATCGCCGCTGGTGCGTTTGCATGAACTGACCAAAAGCTACCCGCAGGCGCAGCGCCTGCCGTTCG TACCGGCAAAGCGGCAAACGGTGCTTTACCCGACGTCGCTGGAGATCCGCCGCGGCGAAATTCTGGGGCTTATCGGCGAA TCCGGTTCGGGGAAAACCACGCTGGGGCGGGCGATCATTGGCCTGACGGAAACTGACAGCGGTGATATTGAGTTTGACGG CGTTTCCCTGACCCGCGCCAGTCATGCCACGCGGCAGAAAATGCGCCGCCGGGCGCAGATAATCTTTCAGGATCCTTACG CCAGTCTGAACCCTAAAATGACCATCGGTGAGCAAATTGCTGAGCCGCTTCGTGTCTGGAAATTGCGTCCTGCCGGACAG ATTCAGGCGCGGGTAGAGGAATTACTGAAACTGGTAGGGCTGGAAGCTCACCACGCCAGCCGGTTGCCCGGCGCATTTTC CGGCGGTCAGCGTCAGCGCGTGGCGATTGCCCGTGCGCTGGCGTTAGAACCGGAACTGCTGGTGGCGGATGAAGCGGTGT CGGCGTTAGATCTCTCGGTGCGCGGGCAGATCCTGACGTTGCTGGATGAACTCCGTCAGCGACTCGGCCTGACCGTGCTG TTTATCAGCCATGATCTCGCTGCGGTAAAACAGGTGTGTGACCGGGTTGTGGTGCTTTATCACGGCAATATTGTGGAAAG CGGGCTTACCGCACAGGTGCTGGGCGCGCCGCAGCACACGTATACGCAAACCTTACTGGCGGCAGCGCCGGATATCAGGC AGGCGCTGCAACTGCGCAATGTCAGTTAA Protein sequence : MTTARPLLDVRHLAIHTDAGLPLVKSLSLQVNRREMVALVGESGSGKTLSSLALMGLLPPGVSMTGGEIWLTGKSIASPQ GAFDASARGQRLAMIFQEPMTSMNPVLKVGEQIAEVLVRHQGSGWKQAHREAIALLDRVGIQNPQQRANQYIHQLSGGMR QRVMIASAISCKPSLLIADEPTTALDVTIQAQILALLLELQQEMQMGVLLITHDLSVVARYADRAYVMHQGSLVEEGPVA TLLTDPQEPYTRKLIAASQPEPRPVSAEISAISPLVRLHELTKSYPQAQRLPFVPAKRQTVLYPTSLEIRRGEILGLIGE SGSGKTTLGRAIIGLTETDSGDIEFDGVSLTRASHATRQKMRRRAQIIFQDPYASLNPKMTIGEQIAEPLRVWKLRPAGQ IQARVEELLKLVGLEAHHASRLPGAFSGGQRQRVAIARALALEPELLVADEAVSALDLSVRGQILTLLDELRQRLGLTVL FISHDLAAVKQVCDRVVVLYHGNIVESGLTAQVLGAPQHTYTQTLLAAAPDIRQALQLRNVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-77 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-77 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 8e-77 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-77 | 43 |
