Gene Information

Name : Rahaq2_0234 (Rahaq2_0234)
Accession : YP_005198321.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 250949 - 252139 bp
Length : 1191 bp
Strand : -
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence :
ATGAAAAATCTGAACACTTCACGTTCTTTAGGGATGCGTACCCTCGCCGTTCATGGCGGACAGCAGCCCGATGCCCTGAC
CGGCGCCATTGCCACGCCAATCACCGCCGCATCGGCATTTTCATACCCGGATTTCGACAGCGGCGCACGCCGTTTCAGCG
GTGAAGAACCCGGCTATATCTACAGCCGTTTCGCCAATCCGACAGTGGCCGTTTTCGAACAAAAACTGGCGGCACTCGAA
GGCGCAGAAACCGCCGTTGCCTGTGCCAGCGGCATGGCGGCCATCAGCGCCACATTGTTTGCCCTGCTGGTTCCCGGCGA
TGAAATCATTCATATCGGCACGCTGTACGGCGGCACCGAAGGCGTGGTCCGTAATCTGCTGCCGCGATATGGTATCAAAC
CGGTTCACGTTGCGAATGTGAATGAACTGGAAGCCGCATTCACCAAAAATACCAAAGTGGTACTGGTGGAAACTCCCGCT
AATCCGGGGCTGGATATCGCCGATCTGGCAGAAATCGCGCGTCTTTCCACAGCCGCCGGTGCGGTGAGTGTGGCGGATAA
CACTTTCGCCACGCCGTACCTGACGCGTCCGCTGGAACTGGGCATTGATATCGTTCTGCATTCCGCGACCAAATACATCA
GCGGTCACGGCGATGCGACCGGCGGCGTGGTGGCGGGTTCGGCGGCGTTAATCACGCCAATCCGCACCCTGAGCCTGAAA
CAGTTCGGTGGCAACCTGGGCCCGTTCGAAGCCAGTTTGCTGATCCGCGGCCTGAAAACCTTGCCGCTGCGCGTCGAAGC
CAGTTCGCTGAGCGCGCAGGCGGTGGCGGAATTCCTCGACGGCCACAGCGCGGTAGACACCGTGTTCTATCCGGGGCTGA
AACAGCATCCGGGGCACGCCACCGCCTCGCGCCAGATGAAACTGTTTGGTGGAATCATGGCGATTGAGCTGAAAGGCGGG
CTGAACGCCGCACGGACTTTCCTCGATAAGCTGAGCATTATCACGCAGGCGGTCTCGCTCGGCGACACCGATTCGCTGGC
CTGCCATCCGGCATCCACCACGCACAGCGCCGTCGCGCCGGAAGTCCGCCGTCAGAGCGGTATCACCGACGGGCTGGTGC
GCATCAGCATCGGTATCGAAGACACCGCAGACCTGATTGCTGATCTGCAACAGGCGCTGGAAGGGCTGTAA

Protein sequence :
MKNLNTSRSLGMRTLAVHGGQQPDALTGAIATPITAASAFSYPDFDSGARRFSGEEPGYIYSRFANPTVAVFEQKLAALE
GAETAVACASGMAAISATLFALLVPGDEIIHIGTLYGGTEGVVRNLLPRYGIKPVHVANVNELEAAFTKNTKVVLVETPA
NPGLDIADLAEIARLSTAAGAVSVADNTFATPYLTRPLELGIDIVLHSATKYISGHGDATGGVVAGSAALITPIRTLSLK
QFGGNLGPFEASLLIRGLKTLPLRVEASSLSAQAVAEFLDGHSAVDTVFYPGLKQHPGHATASRQMKLFGGIMAIELKGG
LNAARTFLDKLSIITQAVSLGDTDSLACHPASTTHSAVAPEVRRQSGITDGLVRISIGIEDTADLIADLQQALEGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-57 42
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-56 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_0234 YP_005198321.1 cystathionine beta-lyase/cystathionine gamma-synthase BAC0207 Protein 4e-83 49