Gene Information

Name : Rahaq2_2219 (Rahaq2_2219)
Accession : YP_005200215.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Resistance
Product : polar amino acid ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2346796 - 2347626 bp
Length : 831 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGCCGCAAGACACTTACTCAACCGCAGCGACGTCTGCGGTTTTTTCACATTCATCTGCCGGTAAAACCGCCGCTGTCGA
ATTCCGCCAGGTCAGTAAATCTTTTGGTCCGCATGAGGTGATCCGCAAGGTGGATTTGCGCGTGGACAGCGGCGAAGTGG
TGGCGGTTTGCGGGCCTTCCGGTTCCGGGAAATCGACGTTGATCCGCCTGATTAATCAGCTGGAAACCGTCAGCGGCGGT
GAAATTCTTATCGACAACCAGCCCACGCGAAACCTCAAAGGTGCCGCATTACGCCAGTTGCGCACGCACATCGGCTTTGT
GTTTCAGCAGTTCAATCTGTATGCCCATCTTACCGCCGAGGACAACGTCAGTCTGGCGCTGATTAAAGTGCATGGCTGGA
AGAAAACTCAGGCACGCGAGAAAGCACGCGCATTGCTGAAACGCGTTGGACTGGGCGATAAAGCCCTGCATTATCCCGAA
CAGCTTTCCGGCGGTCAGCAGCAGCGCGTGGCGATTGCCCGGGCGCTGGTCACCGATCCGGGCATTATTTTATTTGATGA
ACCGACGTCAGCGCTCGATCCGGAAATGATCGGCGAAGTATTGCTGGTGATGCAGGAACTGGCGAAAAGTGGCATCACCA
TGATTGTGGTGACGCATGAAATGACCTTTGCCCGTGAAATCGCTGACCGGGTGATTTTCATGGATGGCGGCGAAATTCTT
GAGCAGGCTCAGCCGGAAGAGTTCTTCCTGCGTCCGCAGCATCCGCGTGCGCAGCGGTTCCTGCAAAAAGTGCTGTTCCC
GCTGCATCCGCAGGCAGGAGCAGGGCGATGA

Protein sequence :
MPQDTYSTAATSAVFSHSSAGKTAAVEFRQVSKSFGPHEVIRKVDLRVDSGEVVAVCGPSGSGKSTLIRLINQLETVSGG
EILIDNQPTRNLKGAALRQLRTHIGFVFQQFNLYAHLTAEDNVSLALIKVHGWKKTQAREKARALLKRVGLGDKALHYPE
QLSGGQQQRVAIARALVTDPGIILFDEPTSALDPEMIGEVLLVMQELAKSGITMIVVTHEMTFAREIADRVIFMDGGEIL
EQAQPEEFFLRPQHPRAQRFLQKVLFPLHPQAGAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 3e-22 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-24 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-17 41
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 6e-43 41
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 1e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_2219 YP_005200215.1 polar amino acid ABC transporter ATPase NC_012469.1.7686878. Protein 4e-32 45