Gene Information

Name : Rahaq2_2194 (Rahaq2_2194)
Accession : YP_005200192.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2320734 - 2321237 bp
Length : 504 bp
Strand : -
Note : PFAM: Redoxin

DNA sequence : 
ATGACCCAGACAGTACACTTTCAAAGCAACCCGGTTAGCGTTGCAGGCAAAATCCCTCAGAAAGGCGATGTAGCAAGGCC
TTTCACCCTGGTCGCCAAAGATCTTTCTGATGTCAGCCTGAGCAGCTTCGCGGGCAAGCGTAAAGTCCTGAACATTTTCC
CAAGCATCGATACCGGCGTTTGCGCCACGTCTGTGCGTAAATTCAATCAGCTGGCGGGCGAAATCGACAACACCGTGGTG
CTGTGCATTTCCGCTGACCTGCCATTCGCCCAGTCGCGTTTCTGCGGCGCGGAAGGTCTGTCTAACGTGGTCACCCTGTC
CACCCTGCGTGGCGGTGATTTCAAATCTGAATACGGCGTGGGCATCACCGACGGCGCATTGTCTGGTCTGACCGCCCGTG
CGGTGGTGGTTCTGGATGGTCAGGACAACGTTTTGTACAGCGAACTGGTGAATGAAATCACCACTGAACCTGACTATGAA
TCTGCGCTGGCTGTGCTGAAGTAA

Protein sequence : 
MTQTVHFQSNPVSVAGKIPQKGDVARPFTLVAKDLSDVSLSSFAGKRKVLNIFPSIDTGVCATSVRKFNQLAGEIDNTVV
LCISADLPFAQSRFCGAEGLSNVVTLSTLRGGDFKSEYGVGITDGALSGLTARAVVVLDGQDNVLYSELVNEITTEPDYE
SALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-33 50
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-33 50
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-33 50
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-34 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_2194 YP_005200192.1 peroxiredoxin VFG0087 Protein 3e-34 50