Gene Information

Name : Rahaq2_1859 (Rahaq2_1859)
Accession : YP_005199865.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1960536 - 1961336 bp
Length : 801 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
TTGAAATCTGCGAGGTTGCCACGAAGCACCTGGTACTGGTGGCAATCGCGGGAGCAAGCCGGGGATGACGTGACGTTATG
TGACGCCATCGGGCAACTGGCCATCCGCCATAAGCGGTGCTATGGCTATCGCCGCGTCACGTTAGAACTGCGCAATCAGG
GCGTGCGGGTCAATCATAAAAAGGTGTTCCGCCTGATGCGGGAAATGGATGTACAGGCGCGGGTGCGGCCTAAAAAATAC
CGGAGTTATAAGGACGATATCGGGATGGCGCCAGCGCCCAATCTGCTGAGACGGAAATTTAACGCCTCCGGACCGGGGGT
AAAGCTGGTGACGGATGTTACCGAGTTCAATGTGGGCGGGGATAAACTGTATTTATCGCCGGTCATGGATTTATACAATG
CAGAAATCATCGCGATGAGTATAGGTACGCGGCCGACTTTCGAGCTGACTGAAAAGATGCTAAATGATTTACTTACATCA
GGTTACGTCAGAAAAAAAGCCATTCTACATAGCGATCAGGGCTGGCAATATAGGATGCCTTCGTGGCAAAAAAGGCTCAA
AGAGGCAGGGATAAGACAGAGCATGTCGCGAAAAGGCAATTGCTATGACAATGCCGCAATGGAAAGCTTTTTTGCGGTGT
TGAAGACGGAGATGTTCCACGGTTATAAGTTCGAGAGCAGGGAAAAACTGGCTGAGTCGATAGAAGCGTATGTCGCTTAC
TATAACCACGATAGAATAAAGATGAAGTTGGGTGGAATGAGTCCAGCAGATTACCGGACTCAAATGTTCCCCCTGCACTA
A

Protein sequence :
MKSARLPRSTWYWWQSREQAGDDVTLCDAIGQLAIRHKRCYGYRRVTLELRNQGVRVNHKKVFRLMREMDVQARVRPKKY
RSYKDDIGMAPAPNLLRRKFNASGPGVKLVTDVTEFNVGGDKLYLSPVMDLYNAEIIAMSIGTRPTFELTEKMLNDLLTS
GYVRKKAILHSDQGWQYRMPSWQKRLKEAGIRQSMSRKGNCYDNAAMESFFAVLKTEMFHGYKFESREKLAESIEAYVAY
YNHDRIKMKLGGMSPADYRTQMFPLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 9e-49 48
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 9e-49 48
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 8e-55 47
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 9e-54 45
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-41 42
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-41 42