Gene Information

Name : Rahaq2_1737 (Rahaq2_1737)
Accession : YP_005199750.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1835135 - 1835329 bp
Length : 195 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory protein (AlpA)

DNA sequence :
ATGGGACCTTATCAACTATTACGTCTAAAACAGGTCGAAGAAAAAACGGGCCTGAAGCGATCACAAATCTATCTGTATAT
GAAGGGCGGTACCTTTCCCCGCTCAATCAAGATTGGCCCTGCGAGTGTCGCGTGGCTCGAATCGGAAATTGACGAATGGA
TAAATATTAAATTAGTCCGCCGCTCAATAGACTAA

Protein sequence :
MGPYQLLRLKQVEEKTGLKRSQIYLYMKGGTFPRSIKIGPASVAWLESEIDEWINIKLVRRSID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-20 86
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 6e-20 86
unnamed CAA21398.1 - Not tested HPI Protein 2e-20 86
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 6e-09 50
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 6e-10 50
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 6e-10 50
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 4e-10 50
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 1e-09 48
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 1e-09 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_1737 YP_005199750.1 putative transcriptional regulator VFG1118 Protein 2e-10 50