Gene Information

Name : Rahaq2_1728 (Rahaq2_1728)
Accession : YP_005199741.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : type IV secretory pathway, VirB6 component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1827831 - 1828862 bp
Length : 1032 bp
Strand : -
Note : PFAM: TrbL/VirB6 plasmid conjugal transfer protein

DNA sequence :
ATGTCCGGTGGTATTTTTGTTGGTATGGACAAAAACATCATGGATGGACTTAACGCCGTGTTAGAAGGTCAGTCTTCTAC
CTACGGCACCCTAATCAGTGTGATTATCGTCAGTTCCTTCACCCTATTTATTACGTATCGCGGGTATCAGACGCTTGGCG
GCAAACTCCAGACACCGGTTGAAGATGTTGTCTGGGATGTGGGGCGCATGTTGCTGATCACCACCTTTGTTTTAAACCGC
GATGGCTGGCTGAATGCCATCATTGCGGCCATTGAAGGGCTTAAGGACGGCATCAGTGGCGATGATAATGTCTGGGCACT
GCTCGACACGGTGTGGGAAAAGGCACAAGCGCTGGGGCAAACGCTGTTTAATCTCGATACCTCCACCTACGTTAAAGTGA
ATGGCGGTTTTGCCGAGGTGCTGGTCTGGGGCGGTGCAATCTTTCTGTTACTGGCTGCAACGTTTGTCAACCTGCTCGCC
GAAATCACCATTCTGTTAATGACCACCACCGCCCCACTCTTTATTTTCTGCCTGCTGTACGGTTTTCTTAAACCCATGTT
TGATAACTGGCTGAAAACACTATTTACCGCAATCTTAACGATCATGTTCTCTGCCCTGTCTGTCCGGATCGCCATCAACT
ACCTGAATAAAATACTGGATGCCGCCACAGCAACGTCTGCTGAAAGCAATATGGTGACCCTGGCGGCGCAATGTTTGCTG
GCCGGGATTGCAGCAGGCGTAGTGGTGTATTTTTCAGCGAAAATAGCCACTGCGCTAAGCGGTGCAGCCGTGCAGGCCGT
GTTACAGGGTGCAGCCATGAGCGGACTGAGCGGGCTGGTGAGCAAATCTGCCGACGTCGCCAGACCCGGCATAAAGGCCG
GGGGCCGACTGACCGCCAAAGGTGGCATGGCAGCAGCCGCGACAACCGGCAGGTTCATTGCCGCTGGTGCGGGCAAAGCC
GGGAACGCCTGGCAGAAACGTGCCACCGCCATCGAAAGCATGAAACGCCAGAATCAGCAGCGTCACCGTTAA

Protein sequence :
MSGGIFVGMDKNIMDGLNAVLEGQSSTYGTLISVIIVSSFTLFITYRGYQTLGGKLQTPVEDVVWDVGRMLLITTFVLNR
DGWLNAIIAAIEGLKDGISGDDNVWALLDTVWEKAQALGQTLFNLDTSTYVKVNGGFAEVLVWGGAIFLLLAATFVNLLA
EITILLMTTTAPLFIFCLLYGFLKPMFDNWLKTLFTAILTIMFSALSVRIAINYLNKILDAATATSAESNMVTLAAQCLL
AGIAAGVVVYFSAKIATALSGAAVQAVLQGAAMSGLSGLVSKSADVARPGIKAGGRLTAKGGMAAAATTGRFIAAGAGKA
GNAWQKRATAIESMKRQNQQRHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70286.1 Pilx6/VirB6-like protein Not tested HPI Protein 3e-58 51