|
Name : Rahaq2_1574 (Rahaq2_1574) Accession : YP_005199592.1 Strain : Rahnella aquatilis CIP 78.65 Genome accession: NC_016818 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : - Position : 1661244 - 1662002 bp Length : 759 bp Strand : + Note : PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase DNA sequence : ATGAGTTTTGTTGCCATTATCCCGGCCCGATTCGGGTCAAGCCGTTTGCCGGGTAAGCCGTTGGCCGATATCAACGGTAA ACCTATGGTTGTGCATGTGATGGAGCGTGCACTGGAGTCGGGTGCTAAACGTGTGATTGTTGCGACAGACCATCCTGACG TTGTGGCGGCGGTTGAGGCTGCAGGTGGTGAAGTTTGTCTTACCCGGCCTGATCATCAGTCAGGCACTGAGCGTCTGGCT GAAGTCATCGATTTATGTCAGTTTTCCGATGATGAAATTATCGTCAACGTACAGGGCGACGAGCCGCTGATCCCGCCGGT TATTATCCGTCAGGTGGCTGATAATCTGGCAAACAGTGAAGCAGGAATGGCGACTCTGGCAGTGCCGATTGAAACAGCGG AAGAAGCGTTTAACCCGAATGCGGTAAAAGTAGTTCGGGATGCCAAAGGTTACGCCCTGTATTTTTCCCGCGCTGCAATT CCGTGGGAACGTGAACGTTTTGCCGTGTCGAAAGAAACGATTGGCGATGTCTTCCTCCGTCACATCGGCATTTATGCTTA CCGTGCTGGCTTCATTCGCCAGTATGTGAAGTGGGAACCGACTACACTTGAGCACATTGAATTGCTCGAACAACTCCGGG TGCTGTGGTACGGTGAAAAAATTCACGTTGATGTGGCGAAGGCCATTCCTTCTGTGGGGGTTGATACCGCTGAGGATCTG GAACGTGTGCGCGTGATTTTAGGCCATAAAAATTCCTGA Protein sequence : MSFVAIIPARFGSSRLPGKPLADINGKPMVVHVMERALESGAKRVIVATDHPDVVAAVEAAGGEVCLTRPDHQSGTERLA EVIDLCQFSDDEIIVNVQGDEPLIPPVIIRQVADNLANSEAGMATLAVPIETAEEAFNPNAVKVVRDAKGYALYFSRAAI PWERERFAVSKETIGDVFLRHIGIYAYRAGFIRQYVKWEPTTLEHIELLEQLRVLWYGEKIHVDVAKAIPSVGVDTAEDL ERVRVILGHKNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 5e-33 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-33 | 45 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-34 | 45 |
