Gene Information

Name : Rahaq2_1556 (Rahaq2_1556)
Accession : YP_005199574.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : phage protein D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1639127 - 1640290 bp
Length : 1164 bp
Strand : +
Note : PFAM: Phage late control gene D protein (GPD)

DNA sequence :
ATGATCACCGGTATGACACTTGATGCCGGGGCGAAAGTGGCACCGGCGTTTATGCTGACACAGACGGGTCATGACATCAC
GAAAGATATCAGTTCCCGGCTGCTGTCATTGACGCTCACGGATAACAGAGGGTTCGAGGCCGACCAGCTCGACATTGAGC
TGGACGACAGCGACGGTCAGGTGGAAATGCCGCTGCGCGGTGCGGTGCTTTCGCTGTTTTTAGGCTGGCAGGGTTCGGCG
CTGACAGGCAAGGGGAGCTTTACGGTTGATGAGGTGGAGCACCGGGGCGCGCCGGATACGCTGACCATCCGGGCGCGCAG
CGCAGACTTTCGCGGAACGCTCAATTCACGCCGTGAAATGTCTTACCATGACACCACGCTCGGTCAGGTGGTCGCGCAGG
TGGCTACACGTAACAACCTGACCGCCAGCGTCGCCGCGCCACTGGCCGCTATCCCTGTCCCCCACATTGACCAGTCGCAG
GAGTCTGACGCCAAGTTTTTAACCCGGCTCGCTACGCGCAACGGAGCTGATGTGTCGATAAAAGCCGGTAAGCTGTTATT
TCTCAAAGCCGGGAGCGCCACCACCGCCAGCGGTAAAGCCATTCCGGCGATGACCATTGAGCGCGCCGACGGTGACCGGC
ACCAGTTTGCTATTGCAGACCGGGGCGCATATACCGGCGTCACGGCGAAATGGCTGCATACCAAAGACCCTAAGCCGAAA
AAGCAGAAGGTTAAAATCAAGCGTAAACCCAAGGTGCAGCACCTGCGCGCGCTGCAACACCCCAAAGCCAAACCGGTGAA
AGCCACCGCCGCCGCTAAAACGCCCGAAGCCAGAGAGGGTGAATATATGGCCGGTGAAGCGGATAACGTTTTTGCGCTGA
CCACCACTTACGCCAGTAAGGCGCAGGCCATGCGCGCCGCGGCGGCGAAGTGGGACAAATTACAACGGGGCGTGGCGGAA
TTCTCGCTAACGCTGGCGATGGGGCGCGCCGATTTATTCCCTGAAATGCCGGTTACCGTCAGCGGGTTTAAGCGCGTCAT
AGACGATCAGGCGTGGGTGATCACTAAGGTGGTGCATTCACTCAGTAATAACGGCTACACGACATCCCTAGAGCTTGAGG
TGCGGCTTTCAGAGGTGGAGTATGAGAGCGAAGAGGAAGAATGA

Protein sequence :
MITGMTLDAGAKVAPAFMLTQTGHDITKDISSRLLSLTLTDNRGFEADQLDIELDDSDGQVEMPLRGAVLSLFLGWQGSA
LTGKGSFTVDEVEHRGAPDTLTIRARSADFRGTLNSRREMSYHDTTLGQVVAQVATRNNLTASVAAPLAAIPVPHIDQSQ
ESDAKFLTRLATRNGADVSIKAGKLLFLKAGSATTASGKAIPAMTIERADGDRHQFAIADRGAYTGVTAKWLHTKDPKPK
KQKVKIKRKPKVQHLRALQHPKAKPVKATAAAKTPEAREGEYMAGEADNVFALTTTYASKAQAMRAAAAKWDKLQRGVAE
FSLTLAMGRADLFPEMPVTVSGFKRVIDDQAWVITKVVHSLSNNGYTTSLELEVRLSEVEYESEEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4601 NP_458684.1 putative regulator of late gene expression Not tested SPI-7 Protein 1e-81 54
t4295 NP_807892.1 regulator of late gene expression Not tested SPI-7 Protein 1e-81 54