Gene Information

Name : Rahaq2_1534 (Rahaq2_1534)
Accession : YP_005199552.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : phage major capsid protein, P2 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1623578 - 1624678 bp
Length : 1101 bp
Strand : +
Note : PFAM: Phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family

DNA sequence :
ATGCGTAAGAACACCCGTTTTAAATTTAATGCCTACCTGTCCCGTCTGGCCGAGCTGAACGGCGTCGATGTGGAGGATTT
GAGTAAAAAATTCAGCGTTGAACCTTCCGTCACGCAGACCCTTATCACTACCGTGCAGGAGTCCTCAGAATTTCTGAGCC
GCATCAACATGGTGCCGGTGGACGAACAGGAAGGTGAAAAAATCGGCCTTGGCGTGACCGGCTCTATTGCCAGTACCACG
GATACCGACGGCGGCAGCGAGCGTAAAACCGCAGATTTTCAGGCGCTGGCTTCACGCAAATATAAGTGTGAACAGGTCAA
TTTTGATTTCCATATCCGTTACAACACCCTCGATTTGTGGGCGCGTTATCAGGACTTCCAGACCCGTCTGCGCGATGCAA
TCGCTAAACGTCAGGCACTGGATTACATCATGGCCGGTTTCAACGGCGTAAGCCGCGCGGAAACGTCTGACCGCAGCAAG
TTCCAGATGTTGCAGGACGTGGCTGTCGGCTGGCTGCAAAAGCTGCGTAACGAAGCCGCCGAGCGCGTGATGGATAAAAT
CACCGACGACACCGGCGCGGTGGTTTCCGACACCGTGCGCATTGGCGTGAAGGGTGATTTTGAGAATATCGACGCGGCGG
TCATGAACGCCACCGATTTTCTGCTGGATGCGTGGCATTCAGAAGACCCCGGACTGGTAGTGATTTGCGGCCGCAAAATG
CTTTCCGATAAGTATTTCCCGCTGATTAACAAGTCGCAGGAAAACAGCGAAAAACTGGCCGGTGACATTATTGTCAGCCA
GAAACGCATCGGTAATTTGCCTGCGGTGCGTGTGCCTTATTTCCCGGACAATGCCCTGCTGATCACCCGTCTGGATAACC
TGTCTATCTACATCATGGACAGCTCACACCGCCGTCATATCGAAGAAGTAGCGCGCCGTGACCGCATCGAAAACTACGAG
TCCCTGAAAATTGACTTTGTGATCGAAGACTACGGCTGCGCGGCGATGATTGAAAACATCGAGCTCGGCGATTTCATCCC
TGAAAAAAACGAACCGGCCTCATCACCGGTGACTGAAACCCAACCTGAAACCGAGGCGTAA

Protein sequence :
MRKNTRFKFNAYLSRLAELNGVDVEDLSKKFSVEPSVTQTLITTVQESSEFLSRINMVPVDEQEGEKIGLGVTGSIASTT
DTDGGSERKTADFQALASRKYKCEQVNFDFHIRYNTLDLWARYQDFQTRLRDAIAKRQALDYIMAGFNGVSRAETSDRSK
FQMLQDVAVGWLQKLRNEAAERVMDKITDDTGAVVSDTVRIGVKGDFENIDAAVMNATDFLLDAWHSEDPGLVVICGRKM
LSDKYFPLINKSQENSEKLAGDIIVSQKRIGNLPAVRVPYFPDNALLITRLDNLSIYIMDSSHRRHIEEVARRDRIENYE
SLKIDFVIEDYGCAAMIENIELGDFIPEKNEPASSPVTETQPETEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 5e-96 57
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 5e-96 57
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 2e-78 50