Gene Information

Name : Rahaq2_1531 (Rahaq2_1531)
Accession : YP_005199550.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : phage portal protein, PBSX family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1619740 - 1620753 bp
Length : 1014 bp
Strand : -
Note : PFAM: Phage portal protein; TIGRFAM: phage portal protein, PBSX family

DNA sequence :
ATGACCCGTAAAAAAAACCGCATCAATAAAAAACTGACGCCGCAATCCGACGCCCAGAAAAGTGAGATTTTCCGCTTTGA
CGAACCGGCCACGGTGATGGATCGCCGCGATATTCTTAATTATCTGGAATGCCTCAGCAACGGGAAATGGTACGAGCCGC
CGGTCACTTTCTCCGGGCTGGCTAAAAGCTTCCGCGCCGCCGTTCACCACAGTTCGCCGATGTACGTTAAGCGTAATATT
CTGGCGAGTACGTTCATCCCTCACCCACTGCTTTCTCAGCAGCAATTCAGCCGCTACGCGCTGGACTACATTGTTTTTGG
TAATGCGTTCATCGAAAAACGCCTGAGCGTGACCGGCCAGCTTCTCAAACTGGAGGCATCACCGGCCAAGTACACGCGCC
GGGGTGTTGAGGAAAATGTTTACTGGTTCGTGGAGAATTACATAACCCCTCACGCCTTTGGTCAGGGAAGCGTATTTCAT
TTGCAAGAACCGGACATTAATCAGGAACTGTACGGCCTGCCGGAATACCTCAGCGCATTAAATAGTGCGTGGCTCAATGA
GTCAGCGACGCTGTACCGTCGGAAATATTTCCTCAACGGCGCACACGCGGGCTATGTCATGTACGTAACTGACCCGGCGC
AAAACTCGCAGGACGTGACCGCACTGCGCGACATGATGACCAAATCCAAAGGGTCAGGGAATTTTAAAAATATTTTCTAC
CACGCTCCCGGCGGAAAATCAGATGCGATCAAAATAATTCCCCTCAGCGAAGTGGCGACCAAGGATGATTTCTTTAACAT
CAAGAACGCGACACGCGACGATCTGCTTAGCGCGCACCGGGTGCCACCACAGATGATGGGCATTATCCCAAATAACACCG
GCGGCTTTGGTGATGTTGAGAAAGCAGCAAAGGTATTTGTGCGTAACGAGCTGGTTCCGTTGCAGGAGCGCATGAAGGAG
ATAAACGAGTGGGTTGGAAAGGAGGTGGTCAGGTTTACTGATTACGAACTCTGA

Protein sequence :
MTRKKNRINKKLTPQSDAQKSEIFRFDEPATVMDRRDILNYLECLSNGKWYEPPVTFSGLAKSFRAAVHHSSPMYVKRNI
LASTFIPHPLLSQQQFSRYALDYIVFGNAFIEKRLSVTGQLLKLEASPAKYTRRGVEENVYWFVENYITPHAFGQGSVFH
LQEPDINQELYGLPEYLSALNSAWLNESATLYRRKYFLNGAHAGYVMYVTDPAQNSQDVTALRDMMTKSKGSGNFKNIFY
HAPGGKSDAIKIIPLSEVATKDDFFNIKNATRDDLLSAHRVPPQMMGIIPNNTGGFGDVEKAAKVFVRNELVPLQERMKE
INEWVGKEVVRFTDYEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 7e-110 63
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 7e-110 63
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 2e-77 50