|
Name : Rahaq2_1510 (Rahaq2_1510) Accession : YP_005199529.1 Strain : Rahnella aquatilis CIP 78.65 Genome accession: NC_016818 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1598809 - 1600101 bp Length : 1293 bp Strand : + Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGCTGGATCCCAATCTGCTGCGTAATGAGCTAGACGCAGTTGCAGAAAAACTCGCTCGCAGAGGTTTTAAACTCGATGT GGAAACGCTACGTTCTCAGGAAGAACGTCGCAAAGTCTTGCAGGTAGAAACGGAAACTCTACAGGCTGAACGTAATTCCC GATCGAAATCTATCGGTCAGGCAAAAGCCCGTGGCGAAGACATCGAACCCCTGCGTCTGGAAGTGAATACGCTGGGTGAG AAACTGGATGCAGCGAAAGCTGAGCTGGATGCATTGCAAAATGATATCCGCGATATCGCTTCTGCTATTCCAAACATGCC TGATGACTCCGTGCCTGCCGGTAAAGATGAGAACGATAACCAGGAAGTGAGCCGCTGGGGCACTCCGCGTCAGTATGATT TCGCCGTACGCGATCACGTATCGCTGGGCGAAATGGCTGGCGGCCTGGATTTTGCCGCTGCCGTTAAACTGACAGGTGCG CGTTTTGTGGTGATGAAAGGGCAAATCGCCCGTATGCATCGTGCGCTGTCACAGTTCATGCTGGATCTGCACACAGAGCA ACACGGTTATCTCGAAACCTACGTTCCCTATCTGGTGAACCAGGAAACGTTGTTCGGTACCGGTCAGTTGCCTAAATTTG GTGAAGACCTGTTCCATACTAAACCGCTGAGTGAAGAAGCGGGCAGCAGTAACTATGCGCTGATCCCAACGGCAGAAGTG CCGCTGACCAACCTGACTCGTGATGAAATTCTTGAAGAAGAATCTCTGCCACTGAAGATGACGGCCCATACGCCATGTTT CCGCTCAGAAGCCGGTTCTTACGGTCGTGATACCCGTGGTCTGATCCGCATGCACCAGTTCGACAAAGTTGAGATGGTAC AAATCGTTCGTCCTGAAGATTCAATGGATGCACTGGAAGAACTGACCGGTCATGCTGAAAAAGTGCTTCAGTTGCTGAAT CTGCCGTACCGTAAAGTTCTGCTGTGTACCGGCGACATGGGCTTTGGTTCGTGCAAAACCTACGATCTGGAAGTCTGGCT GCCGGCGCAGGATACTTACCGTGAAATTTCATCATGTTCAAACATGGGTGATTTCCAGGCACGTCGTATGCAGGCGCGTT GCCGCAACAAAACTGACAAAAAACCGCGTCTGGTTCATACCCTGAACGGTTCTGGTCTGGCGGTAGGTCGTACACTGGTT GCCGTACTGGAAAACTACCAGCAGGCTGATGGTCGTATCGAAGTGCCGGAAGTATTACGTCCGTATATGGGCGGTTTAGA ATATATCGGATAA Protein sequence : MLDPNLLRNELDAVAEKLARRGFKLDVETLRSQEERRKVLQVETETLQAERNSRSKSIGQAKARGEDIEPLRLEVNTLGE KLDAAKAELDALQNDIRDIASAIPNMPDDSVPAGKDENDNQEVSRWGTPRQYDFAVRDHVSLGEMAGGLDFAAAVKLTGA RFVVMKGQIARMHRALSQFMLDLHTEQHGYLETYVPYLVNQETLFGTGQLPKFGEDLFHTKPLSEEAGSSNYALIPTAEV PLTNLTRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMDALEELTGHAEKVLQLLN LPYRKVLLCTGDMGFGSCKTYDLEVWLPAQDTYREISSCSNMGDFQARRMQARCRNKTDKKPRLVHTLNGSGLAVGRTLV AVLENYQQADGRIEVPEVLRPYMGGLEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-106 | 56 |
