Gene Information

Name : sitB (PANA5342_pPANA10019)
Accession : YP_005197789.1
Strain :
Genome accession: NC_016817
Putative virulence/resistance : Virulence
Product : iron/manganese transport system inner membrane protein SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 14361 - 15182 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence : 
ATGAACCCCACAATTGTCGTTTCGGACCTCTCGGTAACCTACCGTAACGGGCATACAGCGTTGCACAACGCCAGCTTTAG
CGTGCCAGCCGGGTCAATTGCTGCACTCGTCGGGGTAAATGGTTCGGGTAAATCTACGCTTTTCAAAGCGCTTATGGGAT
TTGTACCTGCGCGATCGGGCCATATCAGCGTACTGGGATTGCCAACGCGTAAGGCGCTTCGCCGTAGCCTGGTCGCCTAT
GTGCCGCAGGCCGAGGAGGTTGACTGGTCTTTTCCGGTTCTGGTGGATGATGTGGTTATGATGGGGCGCTATGGGCATAT
GGGCCTGATGCGTATCCCTAAACGGCAGGATCGCGATCGGGTGACTGACGCGCTGGCACGCGTTGACATGCTGGATTTTC
GCCATCGCCAAATCGGTGAGCTTTCCGGCGGTCAGAAGAAACGCGTTTTCCTTGCGCGGGCCATTGCGCAACAGGGTGAG
GTGATTTTACTGGATGAACCCTTTACCGGCGTTGATGTTCATACCGAGGCCAAAATCATCAGCTTGTTGCGTGAGTTAAA
GGAGGAAGGAAAAACTATGCTGGTTTCGACCCATAACCTTGGCTCCGTGACCGAGTTTTGTGATTACACCGTCATGGTTA
AAGGCACGGTTCTTGCCAGCGGCCCCACGGCGACGACGTTTACGCAGCAGAATCTGGAGCGCACATTCAGTGGCGTACTG
CGCCATGTCATGACTGAGGGCGGTATCACGCAGGTTATCGCCGATCATGAACGTCCGGTTAATGCATCCATGGACACGCA
TTCATCATGGGGTAAACGATGA

Protein sequence : 
MNPTIVVSDLSVTYRNGHTALHNASFSVPAGSIAALVGVNGSGKSTLFKALMGFVPARSGHISVLGLPTRKALRRSLVAY
VPQAEEVDWSFPVLVDDVVMMGRYGHMGLMRIPKRQDRDRVTDALARVDMLDFRHRQIGELSGGQKKRVFLARAIAQQGE
VILLDEPFTGVDVHTEAKIISLLRELKEEGKTMLVSTHNLGSVTEFCDYTVMVKGTVLASGPTATTFTQQNLERTFSGVL
RHVMTEGGITQVIADHERPVNASMDTHSSWGKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-95 74
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-95 74
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-95 74
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-94 73
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-94 73

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_005197789.1 iron/manganese transport system inner membrane protein SitB BAC0350 Protein 1e-95 74
sitB YP_005197789.1 iron/manganese transport system inner membrane protein SitB BAC0440 Protein 5e-78 59
sitB YP_005197789.1 iron/manganese transport system inner membrane protein SitB BAC0400 Protein 7e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_005197789.1 iron/manganese transport system inner membrane protein SitB VFG0526 Protein 1e-95 74