Gene Information

Name : xerD (PANA5342_0900)
Accession : YP_005194330.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 919529 - 920422 bp
Length : 894 bp
Strand : +
Note : -

DNA sequence :
GTGCAAGATAGTGAACTGACAGAACAGTTTCTTGATGCGCTGTGGATCGAGCGCAATCTGGCGCAAAATACCCTGTCCTC
CTATCGGCAGGATCTGCAAACTCTCACCGGCTGGCTGGCGCATCACGGCTTAACGCTGACAACCCTGAGCGCGCCCGATC
TGCAACAGTTTCTCGCGGAGAGACTGGAAGGCGGCTATAAAGCCTCCAGCTCTGCACGCCTGCTCAGCGCCATGCGCCGT
CTGTTTCAGTATTTGTACCGCGAAAAGATGCGCACTGACGATCCCAGCGCGATGCTGGCCGCGCCCAAGCTGCCCCAGCG
GTTGCCAAAAGATCTGAGCGAGGCGCAGGTGGATCGCCTGCTGCAGGCACCCGATGTCAACGTGCCGCTTGAACTGCGCG
ATAAAGCCATGCTGGAATTGTTATATGCCACCGGCTTACGGGTTTCGGAACTGGTGGGACTGACCCTGAATGACGTCAGC
CTGCGCCAGGGCGTGGTGCGCGTGATCGGTAAAGGCAATAAAGAGCGGCTGGTGCCATTAGGTGAAGAGGCGGTTCACTG
GCTGGAATACTATATGGAGCACGGGCGGCCGTGGTTGCTCAATGGGCAGACGCTGGACGTGTTTTTCCCCAGTAACCGTG
CCCAGCAGATGACGCGGCAAACCTTCTGGCATCGTATCAAGCATTACGCCCTGCTGGCGGGCATTGATAGCGAAAAGCTT
TCTCCCCACGTGTTGCGCCATGCTTTCGCCACGCATTTGCTGAACCATGGGGCTGACCTACGTGTCGTACAGATGTTACT
GGGGCACAGCGACCTCTCAACGACGCAGATTTATACGCATGTCGCCACGGAACGTCTGCGACTGTTACATCAACAGCATC
ATCCGCGCGCATAG

Protein sequence :
MQDSELTEQFLDALWIERNLAQNTLSSYRQDLQTLTGWLAHHGLTLTTLSAPDLQQFLAERLEGGYKASSSARLLSAMRR
LFQYLYREKMRTDDPSAMLAAPKLPQRLPKDLSEAQVDRLLQAPDVNVPLELRDKAMLELLYATGLRVSELVGLTLNDVS
LRQGVVRVIGKGNKERLVPLGEEAVHWLEYYMEHGRPWLLNGQTLDVFFPSNRAQQMTRQTFWHRIKHYALLAGIDSEKL
SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-58 59
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-58 59