Gene Information

Name : PANA5342_0821 (PANA5342_0821)
Accession : YP_005194251.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : ArsR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 843991 - 844719 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence :
ATGGACATGCGCGACAGAATGAAACTGATCCCTTCCCGCCATCATCAGGATAATCAGCCCTCGCTGGAGATCAGCATGTC
TGTGGTCGCCTCGGCGATGGCAGATGCCTCCAGAATGCACATGCTTTGTGCATTGATGGATGGCCGGGCCTGGACCGCCA
CCGAGTTGAGCGTGGTAGCCGATATCGCCCCGTCAACCGCCAGTGGCCATTTGAATAAGCTGCTTGAGACGGGCCTGCTC
GTCTGTGTGGTGCAGGGAAGGCATCGTTATTACAGCCTGGCCGGTCGCGAGGTTGCCAGCCTGCTGGAAAATCTGATGGG
CGTTTCAGTAGCGCCCGGCACCCCGCTTAAAACCACGACGCCAAACCGTCTGAGGCGAGCCCGAACCTGCTACGATCATC
TGGCCGGCGAAATTGCCGTAGCCATCTATGATTTTCTGCAACTGGAAGGCTGGATATGTGAGGACGGCACTGGGCTCACG
CCACGTGGCACAGCTAACTTCGCAAATGCAGGGATTGCGCTTGCGCCCCGCTCCCGGCGAAAAGCCTGCTGTCCCTGCCT
GGACTGGAGTGAAAGACGCTTCCATGCCGGAGGCGAAGTGGGTGCTGCCTTGTTACGCTTTCTGTTGCAAAAGCACTGGC
TGGTTCAGGCGGCGGGATACCGGGAACTGGTTGTGACAGACAGCGGCAAACTGGCCCTTCAGCGTCTGTTCAACATCAGC
CTGAGCTGA

Protein sequence :
MDMRDRMKLIPSRHHQDNQPSLEISMSVVASAMADASRMHMLCALMDGRAWTATELSVVADIAPSTASGHLNKLLETGLL
VCVVQGRHRYYSLAGREVASLLENLMGVSVAPGTPLKTTTPNRLRRARTCYDHLAGEIAVAIYDFLQLEGWICEDGTGLT
PRGTANFANAGIALAPRSRRKACCPCLDWSERRFHAGGEVGAALLRFLLQKHWLVQAAGYRELVVTDSGKLALQRLFNIS
LS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AEA34669.1 hypothetical protein Not tested Not named Protein 6e-53 54
unnamed AAL08443.1 unknown Not tested SRL Protein 3e-41 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PANA5342_0821 YP_005194251.1 ArsR family transcriptional regulator VFG1034 Protein 2e-41 50