Gene Information

Name : nucD (PANA5342_0645)
Accession : YP_005194075.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : phage lysozyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 667308 - 667817 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence :
TTGAGCCAGACCGCTAAACGTTGCGCCGTGGCGGCCGTACTGGCCCTGGCCGCGTTGCTACCGCAAATCAACATGCTGAA
AACCTCTGAAGCCGGCCTGAAGCTGATTGCCGATGCAGAAGGCTGCCGCACCTCGCCCTATCAGTGCAGCGCCGGCGTCT
GGACCAACGGCATTGGTCACACGCAAGGTGTTACCACGACCAGCGTGGTGAACGAGCGCCAGGCCGCGGTAAACCTGGTT
TACGACGTGATGCGCGTTGAACGCGGGATCGACCAGTGCATGCCACGTGAAATGCCGTTCCAGGTTTATGACGCGGTGGT
GTCATTCGGTTTTAACGTTGGCGTGCACGCCGCCTGTCACTCAACGCTGGCGGGATTGATCAACAGCGGCCGCTGGCACG
ATGCCTGCCTGCAGCTTAAGCGCTGGGTATATGTCAAAGGCACCTACAACCCGGGCCTGGATAACCGTCGCCAGCGCGAA
ATGGCGTGGTGTTTAAAAGGAGCGGCATGA

Protein sequence :
MSQTAKRCAVAAVLALAALLPQINMLKTSEAGLKLIADAEGCRTSPYQCSAGVWTNGIGHTQGVTTTSVVNERQAAVNLV
YDVMRVERGIDQCMPREMPFQVYDAVVSFGFNVGVHAACHSTLAGLINSGRWHDACLQLKRWVYVKGTYNPGLDNRRQRE
MAWCLKGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nucD2 NP_458702.1 putative lysozyme Not tested SPI-7 Protein 1e-43 65
nucD NP_807909.1 lysozyme Not tested SPI-7 Protein 1e-43 65