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Name : gabD1 (PANA5342_0488) Accession : YP_005193918.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 515546 - 517000 bp Length : 1455 bp Strand : + Note : - DNA sequence : ATGCATTCTTTACTGCACGACAGCGAACTGTTCCAGACAGGCTATCTGGTAAACGGGCAATGGCTGCGTACCACGTCTAC CTTTGACGTGACGAATCCTGCCACGGGCGAGGTCGTCGCTCAGGTGGCAAAAGCAGGAAAAACGGAAACGGAAGCTGCAA TAAAGGCTGCCCAGGATGCTTTCCCAGCGTGGCGAGCACAGACCGCCAAGGGGCGTTCAGAACTGCTGTACCGCTGGTAT AGGTTAATCATTGAACACAAACGCTGGCTGGCTGAGCTAATGACAACGGAGCAAGGTAAGCCGCTCAAGGAAGCAGAAGG CGAAGTGGAATATGCCGCCAGCTTTATTCAATGGTTCGCCGAGCAGGCTAAACGGGCTAACGGTGAAATCATCCCTCCTG CTAAAGCGGGATCGCGCATTCTGGCAACCCGTGAGCCGGTCGGCGTCGTCGCCGCTATCACGCCCTGGAATTTCCCTATG GCGATGCTGACACGTAAGTTAGGCCCGGCGCTGGCAGCGGGATGTACAGGCATTATTAAACCCGCGAATAACACACCGCT TTCCGCATTTGCCTTACTGGCGCTGGCAAAAAAAGCCGGCATCCCTGATGGCGTGCTTAACGGTGTAGCAGGCGACACGC ATGCCATTAGCGATGCCATTATGGCCAGCAAAGCCGTACGTAAAATTTCCTTTACCGGTTCCACGGCAGTGGGGAAAACG CTAATGCGTAACGCTGCTGAAACCATGAAAAAGGTTTCGATGGAACTGGGCGGTAATGCGCCCTATATCGTCTTTGAAGA TGCGGATATCGATGCAGCAGTGCAGGGAGCCATCGCCAATAAATTCCGCAATGCCGGTCAGGTTTGTGTCAGCGTTAACC GCTTTTTCATTCACAGTGCAGTTTACGAACGTTTTACGACCCAACTGGCCGCTGAAGTGGATAAGCTTAGCGTCGGAAAC GGCATGGATAATGGCGTGGTCGTCGGCCCGTTAATCGAATCATCCGCATTAGAAAAAGTCGAAGAGCATGTCAAAGATGC CATTGCTCAGGGCGGAAAAGTGCTGACGGGTGGTCAGCGGCACGCGCTGGGCGGAAATTTTTGGCAGCCAACGGTCATTG TTGAGGCATATGAAGGCATGAAACTGGCTCAGGAAGAAACGTTTGGGCCGGTGGCAGCCTGTTTCCGCTTTGATGACGAA GAAGAGGTTATCCGTCGTGCCAACCAGACGGAATACGGGCTGGCGGCGTATTTTTATACGCAAAACCTGCAGCGGGTATT CCGGGTTTCTGCCGCGCTCGAAAGTGGAATGATTGGCATCAATGAGTGTGCGGTCTCGACAGAGTTGGCGCCCTTTGGCG GCGTGAAAGAGTCTGGTCTGGGACGTGAAGGATCGGTACTGGGGATGGATGAGTACCTGGAGGTCAAAGCGCTGCACCTC GGCGGGTTAAGTTAG Protein sequence : MHSLLHDSELFQTGYLVNGQWLRTTSTFDVTNPATGEVVAQVAKAGKTETEAAIKAAQDAFPAWRAQTAKGRSELLYRWY RLIIEHKRWLAELMTTEQGKPLKEAEGEVEYAASFIQWFAEQAKRANGEIIPPAKAGSRILATREPVGVVAAITPWNFPM AMLTRKLGPALAAGCTGIIKPANNTPLSAFALLALAKKAGIPDGVLNGVAGDTHAISDAIMASKAVRKISFTGSTAVGKT LMRNAAETMKKVSMELGGNAPYIVFEDADIDAAVQGAIANKFRNAGQVCVSVNRFFIHSAVYERFTTQLAAEVDKLSVGN GMDNGVVVGPLIESSALEKVEEHVKDAIAQGGKVLTGGQRHALGGNFWQPTVIVEAYEGMKLAQEETFGPVAACFRFDDE EEVIRRANQTEYGLAAYFYTQNLQRVFRVSAALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGMDEYLEVKALHL GGLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-131 | 57 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 4e-79 | 41 |
