Gene Information

Name : qseB (PANA5342_4104)
Accession : YP_005197534.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4328994 - 4329653 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCGTTTTGTTGGTCGAAGATGATGAAATGATCGGCGCGAATTTGCAGCAGGCGCTGGAAGCGGCAGGCTGGTCAGT
TGACTGGGTACGCGATGGCGTGTATGCGCAAAACGCCTGGAGCGAAGGCGGCTACAGCTGCGTCCTGCTTGATCTTGGCT
TACCCCGGGACGACGGATTGCAGGTGCTGAGACGGGCACGCGGGCGCGGGGATGCCACACCGGTCTTGATCCTTACCGCC
CGCGATACGGTCGCTCAGCGCGTACAGGGCCTGGATTATGGTGCGGATGACTACCTGCTTAAGCCTTTTGATCTTCAGGA
GGTCATGGCCCGCATGCGTGCGATTACCCGGCGCCATCACGGTTCCGCCGATTCGGTGCTGGGCAGCGGGGATGTTCAAC
TGGATATGCTGACGCGCGAAGTCCTGTACAAAGGGCAACGTGAGCAGTTAACCGCCCGGGAATATGCCCTGCTCTATGCG
CTGCTGGAGCGGCCCGGTGCCATCCTGTCACGCGAGCAGTTAGAGAACCGCATCTATGGCTGGGGCGAAGAAGTCAGCAG
CAATGCAGTAGACGTATTAATCCACGGCATGCGGCGCAAGCTGGATAATGATGTGATCCGCAACGTGCGCGGACTGGGTT
GGCGAGTACCGGCAATATGA

Protein sequence : 
MRVLLVEDDEMIGANLQQALEAAGWSVDWVRDGVYAQNAWSEGGYSCVLLDLGLPRDDGLQVLRRARGRGDATPVLILTA
RDTVAQRVQGLDYGADDYLLKPFDLQEVMARMRAITRRHHGSADSVLGSGDVQLDMLTREVLYKGQREQLTAREYALLYA
LLERPGAILSREQLENRIYGWGEEVSSNAVDVLIHGMRRKLDNDVIRNVRGLGWRVPAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005197534.1 winged helix family two component transcriptional regulator BAC0197 Protein 1e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005197534.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-26 45
qseB YP_005197534.1 winged helix family two component transcriptional regulator VFG1390 Protein 5e-21 42