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Name : PANA5342_4065 (PANA5342_4065) Accession : YP_005197495.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Virulence Product : membrane transport protein Function : - COG functional category : - COG ID : - EC number : - Position : 4285409 - 4286620 bp Length : 1212 bp Strand : + Note : - DNA sequence : GTGACATCTCTTGAACTGACCGCTACGCCACAAAAAGCCTTACCTAACTGGCCTTTAGCATTAAGCGCCGGACTGCTGGG CGTCGGACAGAATGGTTTGCTGGTGGCTATCCCGATGCTGGTTGCGCAGACCAGTTTAAGTCTTTCGGTCTGGGCGGGAT TGTTAACGCTCGGCTCTATGCTGTTTTTGCCCTCATCGCCGTGGTGGGGAAAACAGATTGCGCGTCTCGGCAGCAAACCG GTCGTGCTTTGGTCACTGGCCGGTTATGGCGCAAGTTTTTTGCTACTCGCTATGGGCTGCGCACTTCTTTCCACGCGGGC GGTCAGTGCTCCGATTGGATTAGGTATATTAATTATTGCTCGGGTGATTTATGGCCTGATGGTATCGGCGATGGTTCCGG CGTGCCAGGTCTGGGCGCTAAACCGTGCCGGTGAAGGCAAGCGCATGACGGCGCTGGCGACCATCAGCTCCGGTCTGAGC TGCGGCAGGCTGTTTGGCCCGCTGTGCGCTGCCGGAATGTTAGTTATTCATCCGATGGCACCGCTGGTGTTACTGGTCGT TGCGCCGTTGCTGGCGCTGGCTATGTTGTTGCCGTTGCGCGGTACCGAGCCACAGCCTGCGGTGGCGCGCAGGAATGCCC GCCTGCGCATCGATTGTCTGCCCTATCTGCTGTGCGCTCTGCTGCTGGCGGCCACGGTGAGCCTGATGCAGTTGGGCTTA TCCCCGGCACTGGCCAGACAGTTTACCGGTGATACCGCCGCAATCAGCCATCAGGTTGCCTGGCTGCTGAGCGTGGCGGC CATCGCCTCACTGGGCGCCCAGTTTATGGTACTGCGACCCCAGTTACTGACGCCGCTTGCGCTGTTGCTGAGCGCAGGGC TGTTGATGTCTCTGGGTCTGGCGATGATGCTGAGCACACCGCTCTGGCTGTTTTACACCGGCTGTGCCCTGCTTTCGTTT GGTGCTGCACTGGGTACGCCGGCTTATCAGCTGCTGCTAAATGACAGGCTGGCAGACGGTGCCGGTGCCGGCTGGATAGC CACCAGCCATACCTTAGGCTACGGATTGTGCGCGCTGCTGGTTCCCCTGGTGTCGCAGTCACAGGGCGCAACGGCGCTGA TCGCTGCCGCATTCAGCGCTGCCCTGCTGTTCGTGGCGATGTCAGGTGTGATCTGGCGTGCACGTCGCCGCTCAACCTTA TCGGCTCATTGA Protein sequence : MTSLELTATPQKALPNWPLALSAGLLGVGQNGLLVAIPMLVAQTSLSLSVWAGLLTLGSMLFLPSSPWWGKQIARLGSKP VVLWSLAGYGASFLLLAMGCALLSTRAVSAPIGLGILIIARVIYGLMVSAMVPACQVWALNRAGEGKRMTALATISSGLS CGRLFGPLCAAGMLVIHPMAPLVLLVVAPLLALAMLLPLRGTEPQPAVARRNARLRIDCLPYLLCALLLAATVSLMQLGL SPALARQFTGDTAAISHQVAWLLSVAAIASLGAQFMVLRPQLLTPLALLLSAGLLMSLGLAMMLSTPLWLFYTGCALLSF GAALGTPAYQLLLNDRLADGAGAGWIATSHTLGYGLCALLVPLVSQSQGATALIAAAFSAALLFVAMSGVIWRARRRSTL SAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| shiF | AAD44744.1 | ShiF | Virulence | SHI-2 | Protein | 2e-95 | 74 |
| imm | NP_839224.1 | membrane transport protein | Not tested | SHI-2 | Protein | 2e-95 | 74 |
| imm | NP_709453.1 | membrane transport protein | Not tested | SHI-2 | Protein | 2e-95 | 74 |
| unnamed | AAD54670.1 | unknown | Not tested | SHI-2 | Protein | 8e-95 | 73 |
| shiF | YP_002414047.1 | putative membrane transport protein, major facilitator superfamily | Not tested | Not named | Protein | 7e-95 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PANA5342_4065 | YP_005197495.1 | membrane transport protein | VFG0614 | Protein | 9e-96 | 74 |
