Gene Information

Name : iucB (PANA5342_4063)
Accession : YP_005197493.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : aerobactin siderophore biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4282604 - 4283551 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTCAGGCAACGATTGTTCACAGCGGCCACGGCCTGCGTTGCGAAAAGTCAGGAAAAACCCTGAATCTGGGTTGGGG
ACAGGACAACAGTGCGGTGCTGCATTTTGCCGGTCCACTGCCCGAAGGCTGGCTGCGTGATGCGCTGGATCAGATGTTTA
TCGCTGCCCCGCAGCTTTCTGCCGTGGTGCTGCCCTTCGCAGAGTGGCGTGAAGAGCCTCAGGCGCTGGCGCTGTTTGCG
GCCCTGAAAAGCGATATCGTCCACCGCGAGACGTTCTGGCAACTGCCGCTGTGGTTGTCTGCGCCTCGTCAGCAGGCCTC
CGGCGAGATGGTATTTGATGCCGAACGTGAGATCTATTTTCCCCAGCGCCCAGCGCGACCTGATGGCGAAGTGTATCGCC
GTTACGATCCGCGCGTACGGCGAACGCTGAGCTTCCGCGTGGCCGATCCTGCCCGCGATGCCGAAGCGTTTACCCGCTGG
ATGAACGATCCGCGCGTGGATTACTTCTGGGAGCAGAGCGGATCGCTGGCCACTCAGACCGCCTATCTTGAACGCCAGCT
CGGCAGCAGCTATGCCTTTCCGCTGATTGGCTGTTTTGATGACGAGCCCTTCAGCTACTTTGAAATTTACTGGGCGGCGG
AAGATCGTATCGGGCGGCACTACAGCTGGCAGCCGTACGATCGCGGTTTGCATCTGCTGGTGGGGGAGCCACAGTGGCGC
GGGCCGCACTTTGTGCAGAGCTGGCTGCGCGGCATCAGCCACTATCTGCTGCTGGATAATCCGCAAACCCAGCGCCTGGT
GCTGGAACCGCGGGCGGATAATCAGCGCCTGTTTCGTCACCTTGAACCCGCGGGCTATACCAGCGTGAAAGAGTTCGACT
TTCCGCACAAGCGCTCTCGCCTGGTGATGACCCAGCGCGCCCGTTTCTTCAGCGAGGTGGGCCTGTGA

Protein sequence : 
MSQATIVHSGHGLRCEKSGKTLNLGWGQDNSAVLHFAGPLPEGWLRDALDQMFIAAPQLSAVVLPFAEWREEPQALALFA
ALKSDIVHRETFWQLPLWLSAPRQQASGEMVFDAEREIYFPQRPARPDGEVYRRYDPRVRRTLSFRVADPARDAEAFTRW
MNDPRVDYFWEQSGSLATQTAYLERQLGSSYAFPLIGCFDDEPFSYFEIYWAAEDRIGRHYSWQPYDRGLHLLVGEPQWR
GPHFVQSWLRGISHYLLLDNPQTQRLVLEPRADNQRLFRHLEPAGYTSVKEFDFPHKRSRLVMTQRARFFSEVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB AAK71632.1 IucB Virulence SHI-3 Protein 4e-125 80
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 3e-124 80
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-125 80
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-125 80
iucB AAD44747.1 IucB Virulence SHI-2 Protein 5e-125 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucB YP_005197493.1 aerobactin siderophore biosynthesis protein VFG0616 Protein 2e-125 80
iucB YP_005197493.1 aerobactin siderophore biosynthesis protein VFG1082 Protein 2e-125 80
iucB YP_005197493.1 aerobactin siderophore biosynthesis protein VFG0939 Protein 1e-124 80