Gene Information

Name : PANA5342_4020 (PANA5342_4020)
Accession : YP_005197450.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4234344 - 4236056 bp
Length : 1713 bp
Strand : -
Note : -

DNA sequence :
ATGAATAACGTACGCAACCTGAACCTGGGCACTGCGATGCTGCTCCGGGGGAAATCACCGGCGCAGCAGGGGAATAATGT
CTCAGAAGCCCCCTTGCCAGTCAGCGAGATGGCCATGGTGTTGACGTTGGATCAACTTCGTCCGAATCCCGACAATCCGC
GCAAAAGCAGAAACCCCCGTTTTGACGAGATTAAAGCCTCAATTCGGGCGAGAGGCCTGGATTCTATCCCCAAAGTTACC
CGTGACCCAGAGGGTGACGATGTTTATATTTTCAGTGATGGCGGGAATACCCGCTATCAAATCTTATGTGAGCTGTGGCA
GGAAACAGGCGAAGAGCGTTTTTATCGTGTTCACACCATCTTCAAACCGTGGCCGGGCCGTCTTAAATGTCTGGTTGGCC
ATCTTGCAGAGAATGAGGTCAGGGGGGATCTGACATATCTGGATAAAGCACTTGGCATACACAATGCGAGAACTATTCAG
GAGGAGTTACTTGGGCATTCTGTTTCGCTTCGTGAACTTTCAGAGCTTTTGAATTTAGAGGGTTATCCGATTCATGCATC
CAGCATCAGCAGAATGGAGGATACGTTAAAATATCTTTATCCCTCTATGCCTGAGTTACTTGAAAGCGGGCTGAGCCGGA
GTCAGGTTCTTCCGTTACTTAATCTTCGTTCCCTCGCGGAGAAAGTGTGGCTGAAATTTGGATTAGCTGTGGACACGACT
GATAATTTTCAGTCAGTTTTTTCTCAGACTTGCAGTCAGTTCAACGACCCTGACAGTTTTACCCTTGAGCATTTTCGTGA
CGAATTTATTGGTCATCTTATAAAGGCTCTGCCACACCCCAGCCTGAACTATGACCGCTGGCTGATTGAGCTCGACCCTA
AGGAACAGAAGCGCCGCGAGCAGTTTGGGGAGCCGCCGGCCATGCCCTCCCTTACCCTCAGCCCGGTCCCGGAGCGTTCC
GGCGGGCACACTGCTCCCCTTACCGTTCTGCCGGATGACACGACTTCCAGCACGCCCGTCACCGGCCTGCGCTCAGGCAC
TCTAACTGGCTCAACCCGCCCCGAACCCGCTCCTGAGCAAGCTGGTCATACCGTTCTGCCCGACAGTTCCGGCATTAGCG
CCGGCAGCCTTCCGCGCAGAGAAATCCAGAATGACTTGTTTGGTGGCCGTCCCGTTATTACCGGTGATGGTGTCAACAAT
AACGCTGAACACGGCATGGGGCTGATTTCTCCGGGGAGTCTTTCCCTGGCCTCGGCGTTTGGTGAGCAGGACGATGCGGA
GTCAATGTCAGCCGGGTCCGTGAGCTTTGCCGAAACCGGCCTTGAACCCGTCAGCGACATCTGGCTGATCCCGGCTATGC
AGGATGATGTTGAGCATCTCCAGGACATGGCCTACCGACTTGTCTACGAAATTGCCGAAGGTATGGGGTGTGTAAGCGAC
ATCAGTGAGGACAAAAGCCCTGAGTCTGCCGGTTTTTCCGTATCCGGCGGCAGCAGAGAATTCAGCTTATTCCTGGCAGG
CCTTTCCGGTCGTCTGCCTAACCAGCAGTGCAACATGTTCATGTTCTGTCTGAATTTTTTTGGTTCACAGGAACCGGCCG
ATACGCCGGTATTTGACGACGTCATGGTGGTCAAAATGATGCGCCTTATTCGCATCATTCGCCGCCTGCGTGAGCTGCAG
CGCTTTGCCGCAAAAGGGGGAGAAAATGTCTGA

Protein sequence :
MNNVRNLNLGTAMLLRGKSPAQQGNNVSEAPLPVSEMAMVLTLDQLRPNPDNPRKSRNPRFDEIKASIRARGLDSIPKVT
RDPEGDDVYIFSDGGNTRYQILCELWQETGEERFYRVHTIFKPWPGRLKCLVGHLAENEVRGDLTYLDKALGIHNARTIQ
EELLGHSVSLRELSELLNLEGYPIHASSISRMEDTLKYLYPSMPELLESGLSRSQVLPLLNLRSLAEKVWLKFGLAVDTT
DNFQSVFSQTCSQFNDPDSFTLEHFRDEFIGHLIKALPHPSLNYDRWLIELDPKEQKRREQFGEPPAMPSLTLSPVPERS
GGHTAPLTVLPDDTTSSTPVTGLRSGTLTGSTRPEPAPEQAGHTVLPDSSGISAGSLPRREIQNDLFGGRPVITGDGVNN
NAEHGMGLISPGSLSLASAFGEQDDAESMSAGSVSFAETGLEPVSDIWLIPAMQDDVEHLQDMAYRLVYEIAEGMGCVSD
ISEDKSPESAGFSVSGGSREFSLFLAGLSGRLPNQQCNMFMFCLNFFGSQEPADTPVFDDVMVVKMMRLIRIIRRLRELQ
RFAAKGGENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api3 CAF28477.1 conserved hypothetical protein Not tested YAPI Protein 4e-140 56
YpsIP31758_3746 YP_001402700.1 hypothetical protein Not tested YAPI Protein 4e-137 56
YE3513 YP_001007675.1 putative ATP/GTP binding protein Not tested YAPI Protein 2e-134 54
STY4523 NP_458618.1 hypothetical protein Not tested SPI-7 Protein 1e-129 52
t4228 NP_807830.1 hypothetical protein Not tested SPI-7 Protein 1e-129 52
PMI2639 YP_002152341.1 hypothetical protein Not tested Not named Protein 1e-78 42