Gene Information

Name : PANA5342_4016 (PANA5342_4016)
Accession : YP_005197446.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4231128 - 4232372 bp
Length : 1245 bp
Strand : -
Note : -

DNA sequence :
ATGAACATACCCGCCGACAGCATTGTGGCGCACACGCTGTCACGCATGGAAAAAAGCCTTGAGCGCAGGGCAGTGAATGG
CGACGCCGGCCAGGAACGGAGCGGCCTACTGTTTATGGGCAACGTCCACGATGCGTTTCCCCGCCGGCTTTTTCTCGACA
CGCGCCTGTCGCCGCTCGATAAAACCGCCTGGGTGATGATACGCCTTTATGCCCAGCTGAATGAGGGGGCGGTGTTTCCT
ACCTATGACGAACTGCAGGCACAGCTGGCGTCAGCACATTCGGACAAAGCCTCGCGTGAAACCGTGAGCCGCACGCTGCT
GATGCTGCGGCTCACGGGCTGGATAAGTCTGTGTAAAAAGGTCCGCGACGAGGGCGGCCGGGTACGTGGCAACATCTATG
CCCAGCACGATGAGCCGCTGGGCTACCGTGATGCGGAGACCTTTGACCCGGGCTGGCTGACGCTGGTTGAGCAGAGCTGC
CAGAGTAAGAACAAGTCCGTGCGCATGACGGCGCTGGCCATCGTTAACGACATTCTTCTGGACATGAGTATGCGCCACCG
CCACAGCCGCCTGGCGCTGATTGAAAGCCGCCTTAATGCACCGTCGACGCCGATGTCCATGGTTAGGAAAAACGGCACGG
CACGACCGGGTTCGAAAAACGAACTCAGTCAGAAAACTGTTGAAAAATCCCCTGAAACACTGAGTACGGAATCCGAACTC
AGTCATGCGCAGGGTCGAAAAATACTGAGTACGGAATCCGAACTTAGTCTGAAATCAGGGACTTACAACAGAGTTCGAAA
TTCGAACCGTAACGTACGTTCTTTCACACAGAGTGTGATTAAAGAAACGTACGTTGCTGACCAGCCGGTTTTGCCCGAGA
GTTTTCTGGCCATGCTGAGCAGCGAAGACCGCCAGATGGTCAGCGAGCAGTTCGGTGCGCTGCCGGTGTCGGTGGCTGAT
GCCCTGAGCGGCCTGCTGCAGGAGCAACTGAGCAAAGGCCGTCTGGCGAATCCTGCCGGCTGGATGTTCACCATGCTGAA
ACGTTCCAGACAGGGCGAATTCCGGCCGTCTGAAGCTCCTGCGACGCATTCTGCGCAGGGCTCTGTAAAGCCTGTAAACA
GTGCGGCAGGCAGGTCTTCGCCAAAATCAGATTCAAAACATACGGCTCCCGTCCTGCCTGTAAACCGTGCGACCGCTGAA
CAGGTCAGCGCTGCGATCGCCGCTATCAGACTACAGTTCAGTTAA

Protein sequence :
MNIPADSIVAHTLSRMEKSLERRAVNGDAGQERSGLLFMGNVHDAFPRRLFLDTRLSPLDKTAWVMIRLYAQLNEGAVFP
TYDELQAQLASAHSDKASRETVSRTLLMLRLTGWISLCKKVRDEGGRVRGNIYAQHDEPLGYRDAETFDPGWLTLVEQSC
QSKNKSVRMTALAIVNDILLDMSMRHRHSRLALIESRLNAPSTPMSMVRKNGTARPGSKNELSQKTVEKSPETLSTESEL
SHAQGRKILSTESELSLKSGTYNRVRNSNRNVRSFTQSVIKETYVADQPVLPESFLAMLSSEDRQMVSEQFGALPVSVAD
ALSGLLQEQLSKGRLANPAGWMFTMLKRSRQGEFRPSEAPATHSAQGSVKPVNSAAGRSSPKSDSKHTAPVLPVNRATAE
QVSAAIAAIRLQFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3511 YP_001007673.1 hypothetical protein Not tested YAPI Protein 3e-101 54
api5 CAF28479.1 hypothetical protein Not tested YAPI Protein 2e-100 54
YpsIP31758_3743 YP_001402697.1 hypothetical protein Not tested YAPI Protein 2e-99 53
STY4528 NP_458622.1 hypothetical protein Not tested SPI-7 Protein 7e-73 46
t4232 NP_807834.1 hypothetical protein Not tested SPI-7 Protein 7e-73 46
PMI2635 YP_002152337.1 hypothetical protein Not tested Not named Protein 1e-61 41