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Name : topB3 (PANA5342_4014) Accession : YP_005197444.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 4227941 - 4229959 bp Length : 2019 bp Strand : - Note : - DNA sequence : ATGCGGTTATTTTTGTGCGAAAAGCCTTCTCAGGGGCGTGACCTTGCCGCCGTACTGGGCGCGACCCGGCGTGGTGAGGG CTTTCTGACGGGTAATGGCGTGACGGTCACCTGGGCGGTCGGACATCTGCTGGAGACCGCGCCCCCGGAGGTCTATGGCC AGCAGTACGGCAAGCCCTGGTCGCTGTCTGTGCTGCCAATTCTTCCTTCAAGATGGCAGGTTGTCGTTAAAAAGGACACG CAGGATCAGTTTAAGGTCATTGAGAAACTGCTCAGGCAGGCAGATGAGGTGGTCATTGCGACCGACGCCGATCGCGAAGG TGAAGTCATCGCCCGCGAACTGCTGGACTACTGCGGCTGGGAGGGGAGGATTCTGCGCCTGTGGTTCTCGGCACTGGACG AGCTCAGCGTCCGGGCTGCTCTGAGCGACCTGCGTCCGGGACAGGCTTCGGTTGGGATGTACCATGCCGGGCTGGGACGC TCACGCGCGGACTGGCTGGTCGGCATGAACCTGTCCCGGCTGTATACCCTCCGGGCAGCCGAAGCAGGTTTTGAGGGTGT GGTCTCAGTCGGGCGGGTACAGACGCCCACGCTGGCACTGGTTGTTCGGCGCGACCGCGAAATTGCTGCCTTTGTACCGA AGCCCTTCTGGCAGGTTAAGGCTGTGCTCAGTGCTTCAGGTGTCAGTTTTCAGGCATCGTGGGTCCCGGCCGCCGTCTAT ACGGATGAGGAAAAGCGCTGTATTCACCAGAATATTGCACAGCAGGTGGCGCAGCTCTGCCGCCAGGCGGGTGTTGCCAC GGTGACGGAGTACGAAACTAAACGCGAGAAAGAGGCCGCCCCGCTGGTCTTTTCACTGGGAACGCTGCAGCGGGCCTGCG GCAGGATGTGGAATATGTCGCCACAGCAGGTGCTGGACACCGCCCAGAGCCTGTATGAAACGCACAAGGCTACGACCTAT CCCCGCACAAACTGCGGCTGGCTGCCTGAGTCGATGCGGGAAGAAATCCCGGCCGTGTTTGATGCCATGGCGCGGACTGA CCCCTCACCTGAATTCGCATCCCTGCTTTCACAACTGGACAGAGGGTTTGTTTCCCGCATCTGGAACGATAAAAAAATCA CGGCGCACCATGGCATTATCCCCACGCGCAACGCCGTTCAGCTGTCCGGCCTGACTGAGACAGAGCGCCAGGTCTACCTG CTTATCCGTCGCAACTACCTGGCCCAGTTTCTGCCGCTGTGCGAGTCGGATGCGACGCGCATTTCCTTTGATATTGGTGG CCAGCTGTTCCGCACGACCGGCCGCACCGAAGTCCTGAAGGGCTGGAAAGTGCTGTTTACAAAGGACGAGGAGAATAAGA ACGCTGCTGATGATGAAAACGCAGGTGCCCTGCCACCGCTCAGAAAAGGTGCACAGTGCGGCGTTACCGGCGCAGAGGTT AAGCAGCTCATGACACAGCCGCCTGCACACTTCACCTTTGACACGCTGATTGGTGCCATGATGAACGCCGCTGCGTACGT CACCGACCTTCAGCTGCGTAAAATCCTCAAAGAAAATGCCGGGCTCGGCACTGAAGCAACACGGGCCGGCATTATCGAGC AGCTGCTGAGCCGCCGGTTCATCACGCTCAAAGGCAGTAAACTTCTGGCAACAGACCTGGGGGCGGACGTCATTGATGCC CTGCCAGCGCAGCTGACCGACCCGGGTATGACTGCACTCTGGGAGCAGGCGCTTGACGAAGTGGCTGCCGGCCGTATGAA CCTGAACGACTTTCTGCAGCGTCAGACCGCCTGGACCGCGACGTTAGTCAGCCAGGGTATGCAGCAGCGCATCAGCATCC GGGTGCCGCCTTCGCCTCCGTGCCCGCTCTGCGGCAGCAAAACCGCTCTGCGCAGAAGTCCCAAAGGAGAATTCCGCAGC TGTACGCGCTACCCGGAATGCAAAGGCATCATCAGTCTGGATAAGGCAAAACGCAAAAGCCCGGCCCGTGCTAAGTCGAC AAAAACAAAAAAGAATTAA Protein sequence : MRLFLCEKPSQGRDLAAVLGATRRGEGFLTGNGVTVTWAVGHLLETAPPEVYGQQYGKPWSLSVLPILPSRWQVVVKKDT QDQFKVIEKLLRQADEVVIATDADREGEVIARELLDYCGWEGRILRLWFSALDELSVRAALSDLRPGQASVGMYHAGLGR SRADWLVGMNLSRLYTLRAAEAGFEGVVSVGRVQTPTLALVVRRDREIAAFVPKPFWQVKAVLSASGVSFQASWVPAAVY TDEEKRCIHQNIAQQVAQLCRQAGVATVTEYETKREKEAAPLVFSLGTLQRACGRMWNMSPQQVLDTAQSLYETHKATTY PRTNCGWLPESMREEIPAVFDAMARTDPSPEFASLLSQLDRGFVSRIWNDKKITAHHGIIPTRNAVQLSGLTETERQVYL LIRRNYLAQFLPLCESDATRISFDIGGQLFRTTGRTEVLKGWKVLFTKDEENKNAADDENAGALPPLRKGAQCGVTGAEV KQLMTQPPAHFTFDTLIGAMMNAAAYVTDLQLRKILKENAGLGTEATRAGIIEQLLSRRFITLKGSKLLATDLGADVIDA LPAQLTDPGMTALWEQALDEVAAGRMNLNDFLQRQTAWTATLVSQGMQQRISIRVPPSPPCPLCGSKTALRRSPKGEFRS CTRYPECKGIISLDKAKRKSPARAKSTKTKKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 61 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 61 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 61 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 56 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 6e-159 | 53 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 5e-170 | 52 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 3e-166 | 51 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-151 | 49 |
