Gene Information

Name : PANA5342_4013 (PANA5342_4013)
Accession : YP_005197443.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4226800 - 4227309 bp
Length : 510 bp
Strand : -
Note : -

DNA sequence :
ATGACTGTAACTGCAAACACCCCTGCTTCAAACAACACCGCTTCTGCTGGCGCTGCCACTACCGGCAAAAGCCAGAAAGA
GTATTTCAACCTGAACGTCAGTGGTATCGGCTACCTCAGTTCGATTCGTCGACTGCAGGGCTCTAATGGTGAGTTTACCT
GTGCCGTCATCAATGCCCTGACAGGTCCGACTGACAATGCTTCCTATACCCGCTTCGACATTACCGTTGCAGGTAAAGAG
CAGACATCCCTCATCAACCGCTGTCAGAAAGCCGTTGATGAAGAGGAAAAAGTCCTGATTGGATTTGTACTCAGTGGCCT
GAAAGCCGACGTGTTTACCCTGCAAAGCGGTGAGCATGCCGGTGAATCCCGCCCCTCACTGAAGGCCCGTCTGATAAAGG
TCGAGTTCATCAAAAAGGGTCAGGACGTTGTTTACCAGGCTCCTAACGCTTCCCAGACGCCAGAAACCGGTCCGGCCGCT
CAAAAAGCTTACGATCCGGAATCTTTCTAA

Protein sequence :
MTVTANTPASNNTASAGAATTGKSQKEYFNLNVSGIGYLSSIRRLQGSNGEFTCAVINALTGPTDNASYTRFDITVAGKE
QTSLINRCQKAVDEEEKVLIGFVLSGLKADVFTLQSGEHAGESRPSLKARLIKVEFIKKGQDVVYQAPNASQTPETGPAA
QKAYDPESF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api7 CAF28481.1 hypothetical protein Not tested YAPI Protein 4e-47 69
YpsIP31758_3740 YP_001402694.1 hypothetical protein Not tested YAPI Protein 5e-47 69
YE3509 YP_001007671.1 hypothetical protein Not tested YAPI Protein 2e-46 67
STY4534 NP_458625.1 hypothetical protein Not tested SPI-7 Protein 3e-42 57
t4235 NP_807837.1 hypothetical protein Not tested SPI-7 Protein 3e-42 57
PMI2628 YP_002152330.1 hypothetical protein Not tested Not named Protein 1e-39 56
Pmu_03280 YP_005176227.1 hypothetical protein Not tested ICEPmu1 Protein 4e-25 45