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Name : pilR (PANA5342_4003) Accession : YP_005197433.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilR Function : - COG functional category : - COG ID : - EC number : - Position : 4216563 - 4217642 bp Length : 1080 bp Strand : - Note : - DNA sequence : ATGTCCGTCTTTGAACGATGCCGCTATCACGCCGTGAGACTGACCTTCACCGGCGCACACCGTCAGGTCTTTTACGAGAA CATGCGTTTTCTGCTGGAAAACAAAAAGCCTCTGGGCATTTCGCTGAAAATGATTGGCGATGTGCACACCAGTTTTGGTG AGAAGTGGCATCCCTACCGGGAACTGATCGAAGACTGTCTTGAAGGGCTCAGCGATAACACCCCGGGGCGGACGCTCAGC GACGTGCTGGCCATATGGGTGCCTTACGAGGAAGCCGCGCTCATCAGTGCGGGACTGCGGACAGGGCGAATTCCTGTCTC CCTGGTACAGGCAGACAAACTCATCAGAGCCCGCCAGCGCATCCTTAATCAGGTGGTTTTTGCTTCTGTCTATCCGCTGG TACTGGTTGTACTGGGCGGCGGTCTGCTGGGCGTCAATAACCTCGCGCTTGTTCCGATGCTGAGTAACATTTCCGACCCG GCAGGCTGGACGGGGGCGCTGGGCTTCATGAAAGATCTTTCGGACTGGACGGCTCAGTGGGGCCCTGCAGCGGCATTTAC GGGTGCAGCTCTGACTATGGCCAGCCTGTGGTCCCTTCCCCGGTGGCGCGGCCGCCTGCGCCGCCTCGCCGATAACTTTC TGCCCTGGTCTTTATACAAGGACCTGCAGGGTGCGGTGTTTCTGATGAATACCGGTGCGCTTCTGGGCGCCGGCGTACCT GAGCTGGATGCACTGGAGCTTCTGAACAGTTTTGCTCCCCCCTGGCTGCAGGAACGCATTGAGGCCGCCATGGACGCCAT GAGCGAGGGGAATTCTCTCGGCATGGCGCTGCGCGAGTGCGGCTATGACTTCCCCAGTCGTGAGGCTGTTAACTACCTGT CTCTGCTTGATGACGGCAAGGGTTCAGCCGAAATGATCAGCAACTATGCCGACCGCTGGCTTGAACAGACACTGAAACGC GTGGCCCGCAGGGCCAATACGACCAAATTTTTTTCAATGCTCATGATTCTGGGGTTCTTTGCACTCATCATTCTGATGGT CATGCAACTTCAGGATACAGGCTCATTTAACCTTCGCTGA Protein sequence : MSVFERCRYHAVRLTFTGAHRQVFYENMRFLLENKKPLGISLKMIGDVHTSFGEKWHPYRELIEDCLEGLSDNTPGRTLS DVLAIWVPYEEAALISAGLRTGRIPVSLVQADKLIRARQRILNQVVFASVYPLVLVVLGGGLLGVNNLALVPMLSNISDP AGWTGALGFMKDLSDWTAQWGPAAAFTGAALTMASLWSLPRWRGRLRRLADNFLPWSLYKDLQGAVFLMNTGALLGAGVP ELDALELLNSFAPPWLQERIEAAMDAMSEGNSLGMALRECGYDFPSREAVNYLSLLDDGKGSAEMISNYADRWLEQTLKR VARRANTTKFFSMLMILGFFALIILMVMQLQDTGSFNLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YE3501 | YP_001007662.1 | type IV pilus integral membrane protein | Virulence | YAPI | Protein | 6e-84 | 57 |
| pilR | YP_001402684.1 | type IV pilus biogenesis protein PilR | Virulence | YAPI | Protein | 2e-80 | 56 |
| pilR | CAF28491.1 | putative integral inner membrane protein | Virulence | YAPI | Protein | 2e-80 | 55 |
| pilR | NP_458634.1 | putative membrane protein | Virulence | SPI-7 | Protein | 7e-61 | 44 |
| pilR | NP_807845.1 | hypothetical protein | Virulence | SPI-7 | Protein | 7e-61 | 44 |
| pilR | AAC98886.2 | PilR | Virulence | SPI-7 | Protein | 5e-61 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilR | YP_005197433.1 | type IV pilus biogenesis protein PilR | VFG2314 | Protein | 3e-84 | 57 |
