|
Name : pilS (PANA5342_4002) Accession : YP_005197432.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Virulence Product : type IV prepilin PilS Function : - COG functional category : - COG ID : - EC number : - Position : 4215969 - 4216553 bp Length : 585 bp Strand : - Note : - DNA sequence : ATGTCTGTTTCAAACAATGCCGTAAAAGTTCACCCGGACCGGGGCTGGGGTTTTAGTGAACAGGGCTATATCGCCCTGGG TTATCTCCTTGTTATTACCATTGTGGTAATAGCCGGCTGGAAACTTTTGCACAAAAAAGACACCGCCGTTGAGGTCACCA GCCTGCAAACCATGCTGAGCAACGGCGTGGCCCTTAAAGGACGTAACGGATACGATTATTCCAGCGGTGCCTCCATGACT GGCACCCTTATTAAAAGAGATCTCGCACCGTCCGGTTATACCGTTCACGGCACCCCATCTTCTGGTACTGCCACCCTGAC AAACAGTTACGGTGGTCAGGTCGTCATCGCCCCGGTTGCGGTCAATGGCTACAACAATGCGTTTTCAGTCACAACCCAGA GCCTCCCGCAGTCAGCCTGTATTGATGTTGCATCCGGTATGAACTCATCGGGCACGTCTAATACGCTGACCATCAACAGC ACGGATTTCAGCGATGGTGCCAGCTCTGAGACAATCTCACAGGCCTGTACCGCAGACAGCGGGCGCACCGGCAACAACAC GATTGTCGTGACCCATAACGGCTGA Protein sequence : MSVSNNAVKVHPDRGWGFSEQGYIALGYLLVITIVVIAGWKLLHKKDTAVEVTSLQTMLSNGVALKGRNGYDYSSGASMT GTLIKRDLAPSGYTVHGTPSSGTATLTNSYGGQVVIAPVAVNGYNNAFSVTTQSLPQSACIDVASGMNSSGTSNTLTINS TDFSDGASSETISQACTADSGRTGNNTIVVTHNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilS | AAC98887.1 | PilS | Virulence | SPI-7 | Protein | 4e-30 | 45 |
| pilS | NP_458635.1 | prepilin | Virulence | SPI-7 | Protein | 6e-30 | 45 |
| pilS | NP_807846.1 | prepilin | Virulence | SPI-7 | Protein | 6e-30 | 45 |
| YE3500 | YP_001007661.1 | putative type IV prepilin | Virulence | YAPI | Protein | 7e-27 | 42 |
| pilS | YP_001402683.1 | type IV pilus biogenesis protein | Virulence | YAPI | Protein | 1e-25 | 42 |
| pilS | CAF28492.1 | putative major pilin subunit | Virulence | YAPI | Protein | 8e-26 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilS | YP_005197432.1 | type IV prepilin PilS | VFG2315 | Protein | 2e-27 | 42 |
