Gene Information

Name : PANA5342_3996 (PANA5342_3996)
Accession : YP_005197426.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4211337 - 4212050 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAAACACTGACCGCAGTTCTCATTTTACTGCCGCTCTGGGCGCTGGCATCCACAGCGCAGACCCCGGCAGTTAA
CAGCCGTGTGGCACCGCTTCAGGAAAACACCTCTTCCAGTATGAGCACTCAGCAGCAGGCCCGGCAGTGGGGGTTATCTG
ACAGCGACTGGAGCCGTTATCAGACGCTGATGAAGGGCGAGCGCGGGATCATGTCACCGGGTCTGGACCCACTCACGGCG
CTCGGCGTGGAAACCGATAACAGCGCGGAACGCCGGCGTCTGGCTGAGTTATGGGTAAAACACGAATATCAGCGAACCGA
GAAGGAGCTCGCTTTTCAGCGTGACGTTAATGCGGCCTGGCTTCGCCTCTATCCGGAAACGCTGGCGGTAAACATGGGCG
CCAACGCGGCCGGCATTGCGCACGACACGCAGGGTCGCCTGGCGCTGTTCCTGAAGGAGAACTGCTCACGCTGCGATGCG
CGTCTTGCCGCCGTGCTGGCTGATAACCGCCCTGTAGACCTTTATCTGGTTGGCATCGACAGCGATGACGGCCTGCGTGC
CTGGGCCGTTAAGCACAACATCCCGGTGGAAAAAGTCCGCAGCCGTCAGATAACGCTTAATCACGACAATGGCCTGTGGT
TCAGGTACGGCATGGGTCAGATGCCGGTCATTCTGCAGCAGGGGGAGACCGGATGGCAGGTCGCGGCTTACTGA

Protein sequence :
MKKTLTAVLILLPLWALASTAQTPAVNSRVAPLQENTSSSMSTQQQARQWGLSDSDWSRYQTLMKGERGIMSPGLDPLTA
LGVETDNSAERRRLAELWVKHEYQRTEKELAFQRDVNAAWLRLYPETLAVNMGANAAGIAHDTQGRLALFLKENCSRCDA
RLAAVLADNRPVDLYLVGIDSDDGLRAWAVKHNIPVEKVRSRQITLNHDNGLWFRYGMGQMPVILQQGETGWQVAAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4558 NP_458644.1 putative exported protein Not tested SPI-7 Protein 7e-67 62
t4256 NP_807854.1 hypothetical protein Not tested SPI-7 Protein 7e-67 62
api24 CAF28498.1 conserved hypothetical protein Not tested YAPI Protein 2e-65 62
YpsIP31758_3721 YP_001402675.1 hypothetical protein Not tested YAPI Protein 1e-65 62
YE3495 YP_001007654.1 hypothetical protein Not tested YAPI Protein 2e-62 60
PMI2592 YP_002152311.1 hypothetical protein Not tested Not named Protein 2e-50 49
pph69 CAI36110.1 hypothetical protein Not tested PPHGI-1 Protein 1e-42 44
unnamed ABR13379.1 hypothetical protein Not tested PAGI-5 Protein 4e-38 44
EXA51 ABD94660.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-37 44
RL051 AAP84177.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-37 43
ORF SG71 AAN62293.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-31 43