Gene Information

Name : PANA5342_3976 (PANA5342_3976)
Accession : YP_005197406.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4194560 - 4194973 bp
Length : 414 bp
Strand : -
Note : -

DNA sequence :
ATGAAGAATAATGCCTTAATTTTGCTCATTCTGAGCGGGACAGTTGCGATGCTGCTGAGCGGCTGCAGCACCTCTAAAGA
TGAGATGCTACCGCCGGGTGACAGCACCATGCTGGAGCTCTGGAACAACGGCGCCTCCACCACGCACGCCACGGCTGAGA
GTCGCACCACGCTGCGCCGTCCGGTCTCCGACAGTGAGTACACGATCGGACAGCAGACCCGGGACAGCTACAGCCGCACC
CAGGAAAATGAAATTCAGCAGACGTTTCCGCGCCTGCCCAACCCCGACATGGTGATGTATGTGTTTCCGCATCTGGCCGA
CGGCAACACGCCGGTGCCGGGCTACAGCACCGTGTTCCCGTTTTACAGCCAGGTACAGTATGCGCTGCCCGGCGAACGCA
CGGAGGCGCTGTAA

Protein sequence :
MKNNALILLILSGTVAMLLSGCSTSKDEMLPPGDSTMLELWNNGASTTHATAESRTTLRRPVSDSEYTIGQQTRDSYSRT
QENEIQQTFPRLPNPDMVMYVFPHLADGNTPVPGYSTVFPFYSQVQYALPGERTEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 4e-36 69
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 2e-35 68
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 5e-42 66
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 5e-42 66
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 7e-35 65
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 2e-34 59
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 3e-27 51
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-32 51
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-32 50
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 5e-30 50
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-27 49
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 2e-25 48
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 7e-26 45