Gene Information

Name : PANA5342_3975 (PANA5342_3975)
Accession : YP_005197405.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : putative plasmid-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4191755 - 4194559 bp
Length : 2805 bp
Strand : -
Note : -

DNA sequence :
ATGGCCTTTCGTCTTTTTCGCCGCAGCCGTGAAGCGCAGACTGAACATCAGCACGGTCACGGGCCGTTCTCGGTTGAGGG
CCATGAGCCGATCACCCGTGACGGCCGGCTGACGCACGCCGATGAATCAGGCCTGTATGCCACCGGTCCCTCCATCATCG
ACCACGTTCCCTGGGGTGAATACCTTCCCGAACACCAGTGCATCCTGCTCGATGACGGCGTTTCTGTGGGAGCAGTTTAT
GAGATCAATCCGGTCGGCACTGAAGGCCGTCCCGAATCGCGCCTGGAGGAAATCCGTGACGTGGTTGAAAATGCGCTGCA
GGACAGCATTCCTGAACTGGACTCACACCAGTGGGTGGTACAGTTTTTCTGTCAGGACGATTCAGATCTGTCGGCGTATA
TGGATTCAATCCGGGACTACGTCAGACCCCGGGCACAGGGCACGGCTTTCACCGAGGCCTGGCTGAACGAACAGGAGCGG
CACCTGAAGAACGTGGCCGCTGAAAAAGGCCTGTTTGTGGATGAAACCGTGACAGGTGCACCCTGGCGCGGGCAGATCCG
TCGCACACGCATGGTGGTTTACCGCTGGGTGGAAAAACCTTACCGTGACCCGATGGCGCCGGAAGTTTTACTGAATCAGG
TCTGCGACCGTCTGACCTCGGCAATGAGCGGTGCCGGCATTCGTTCCGTGCGCCAGAACGGTGAGCAGATACACAGCTGG
CTGCTGCGCTGGTTCAACCCGGCCCCCCAGTGGACAGACAAGGCCACGCTTTACCGCTGTGCCCGTCACCGCGATGACGC
GCCCGGCGACCTTCCTCTGCTCAATGACTTCAGCGAAAGCCTGTGGTTCACCCGCCCCCGCAGCGATGCGGACAAGGGCA
TATGGTGGTTTGATAACGTTGCGCACAAAGCGGTGCCTGTCGCCCGACTTCGTACCCGCCCGCAGACAGGACACCTCACC
GGTGAGGTAAAGCGCGGTGACAACATCAACGCCATTATGGATCTGCTGCCGGAAGGCACCGTGCTGGCCATGACGCTGGT
TGTGCAGCCTCAGGACAAACTGGAGGCAAATTTTGCCAGCCTGAGCCGCAACTCGATGGGAGAGAACGTCGATTCGCTGC
GTGCGCGTGAAGATGCCGCCACGGCCCGCACGTTCCTGGGTAACAAGCACAAGCTTTACCGGGCGGCCATTACCCTGCTG
ATAAAGGGTCAGGACGAGGACACCCTGAGCAGACGCTACCTTGACCTCAGCAGTAAGCTTCTGAACTGCGGGCTGGAGCC
GGTGAATCCGGAACATGATATCGGTCCGCTCAGCACCTACATGCGGGCTCTGCCGATGTGCTTTAACCCGCAGCACGACC
GCCACAACTGGTACACGCGCCTGATGTTTGTCCAGCACTTTGCCTGCCTGTCGCCGGTTTACGGGCGCGATACCGGCACA
GGCCATCACGGACTCACCTTTTTTAACCGGGGCGGCGGTCCGCTGTCTGTTGACCCACTTAATAAAGCGGATCGCACCCA
GAACGCGCACCTGTTGCTGTTTGGCCCGACCGGTGCCGGCAAGTCTGCCACGGCGGTCGACAAGCTGTCTCAGATGGTGG
CCATCTATCGATCGCGTATTTTCCTGATTGAGGCGGGGAACAGCTTTGGCCTCTATGGTGACTACTGTGCGTCGCTGGGC
CTCAGCGTTCATCGCGTCAGCATCAAGCCCGGCAAGGTCGTGTCGCTGGCACCCTTTGGTGACTCGCACCTTTTGCTGGA
TGTGAAGCCCGAAGCGTTGCTCATCATTGAGGACGACCTGCCGGATACAGATGCAGACGATGAGGATGATGAAGACGGCG
AGCGTGACGTTCTGGGCGAGATGGAAATTGCTGCCCGCCTGATGATTACCGGCGGTGAAGCCTCGGAAGAGTCCAGAATG
ACGCGTGCCGACCGTGGCATGATCCGCGAAGCCATCATGAATGCCGCCCGTAAGGCTTACACTGAGTCCCGCCAGATGCT
GCCCGAGGACCTGATGTTCGCGCTGCAGGACATTGCTCATGACATCAGCCTGGGCGACGACGGCCGCGAGAAACGCACGC
CGGCCCGTCGCGCACGCGCCGAGGAAATGTCAGAGGCGCTGCGCATGTTTACGGAAGGCTTTGAGGGCGAACTGTTCAAC
CGCCCAGGCACCCCCTGGCCTGAGGCTGATATTACGATCGTGGACCTTGGGCAGCTGGCCCGCGAAGGGTACGAGGCTCA
GATGGCCGTGGCGGTAATTTCTCTGCTGAACACCATCAATAATATCGCTGAGCGCGATCAGTATCTCGACCGTGACATCA
TAGTGCCCATTGATGAGGGGCACATAGTCACCACGAATCCGCTGCTCGGGCCCTATGCCACCAAAATTGCCAAAATGTGG
CGTAAGTTAGGCACCTGGCTGTGGATTTTCACCCAGAACCTTGCCGACTTCCCCGACACGTCAAAAAAGATGCTGAACAT
GGCGGAATGGTGGATTTGTCTGGTAATGCCACCTGAAGAGGTTGAGCAGATTGCCCGCTTCAAGACGCTTAATGATGAGC
AAAAAGCGATGCTGCTCTCCGCCACTAAACTGCCACGCAAATACACTGAGGGAGTCATTCTGTCACGTAAGGTGCAGGCG
TTGTTTCGGGCCGTACCACCGAGCCTCTACCTGGCGCTGGGCATGACAGAAAAAGAAGAAAAAGCAGAACGACGGGCCAT
CATGAATGAATTTAAATGTACGGAACTTGAGGCCGTTTACCATGTTGCACGTCGTCTTGACGAGAGCCGTGGTCTTATTC
ACTGA

Protein sequence :
MAFRLFRRSREAQTEHQHGHGPFSVEGHEPITRDGRLTHADESGLYATGPSIIDHVPWGEYLPEHQCILLDDGVSVGAVY
EINPVGTEGRPESRLEEIRDVVENALQDSIPELDSHQWVVQFFCQDDSDLSAYMDSIRDYVRPRAQGTAFTEAWLNEQER
HLKNVAAEKGLFVDETVTGAPWRGQIRRTRMVVYRWVEKPYRDPMAPEVLLNQVCDRLTSAMSGAGIRSVRQNGEQIHSW
LLRWFNPAPQWTDKATLYRCARHRDDAPGDLPLLNDFSESLWFTRPRSDADKGIWWFDNVAHKAVPVARLRTRPQTGHLT
GEVKRGDNINAIMDLLPEGTVLAMTLVVQPQDKLEANFASLSRNSMGENVDSLRAREDAATARTFLGNKHKLYRAAITLL
IKGQDEDTLSRRYLDLSSKLLNCGLEPVNPEHDIGPLSTYMRALPMCFNPQHDRHNWYTRLMFVQHFACLSPVYGRDTGT
GHHGLTFFNRGGGPLSVDPLNKADRTQNAHLLLFGPTGAGKSATAVDKLSQMVAIYRSRIFLIEAGNSFGLYGDYCASLG
LSVHRVSIKPGKVVSLAPFGDSHLLLDVKPEALLIIEDDLPDTDADDEDDEDGERDVLGEMEIAARLMITGGEASEESRM
TRADRGMIREAIMNAARKAYTESRQMLPEDLMFALQDIAHDISLGDDGREKRTPARRARAEEMSEALRMFTEGFEGELFN
RPGTPWPEADITIVDLGQLAREGYEAQMAVAVISLLNTINNIAERDQYLDRDIIVPIDEGHIVTTNPLLGPYATKIAKMW
RKLGTWLWIFTQNLADFPDTSKKMLNMAEWWICLVMPPEEVEQIARFKTLNDEQKAMLLSATKLPRKYTEGVILSRKVQA
LFRAVPPSLYLALGMTEKEEKAERRAIMNEFKCTELEAVYHVARRLDESRGLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 71
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 70
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 70
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 63
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 59
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 52
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 51
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 50
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 48
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 48
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 48
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 48