Gene Information

Name : PANA5342_3969 (PANA5342_3969)
Accession : YP_005197399.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4185448 - 4185855 bp
Length : 408 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATCCCCCTCTGCAGCCTTGCCGTTTTGTTACTGACTACCGGAGCCCACGCCGGCACCGTGATTTACACCGACCA
TGCACATCCTGTCACCGGCGAACTGAGCCCGGACATCACTGTCACCGAACTGGACGCGCCCGATCGCCTTCAGGCTGAAC
TCTTCGGCCCGTTATCCGCTAATCCGGCGCAGGCTGAGCAGCAGGCTCGGGCGGTCATCGCCTCCCCGGCGTTCCGTCAG
AATCAGCAGGCCTTAGCGTCGGGCTATGCGGGTGTTGCGCATGCCTGGTCGCTGGGGCTGGAAAAGTATCCCGCCGTGGT
GTTCGACGATAAATGGGTGGTGTACGGCACCACCGACGTCGCCTCAGCGCGGGCGAAACTGGATGCCTGGCGGGAGAAAC
AGCCGTGA

Protein sequence :
MKIPLCSLAVLLLTTGAHAGTVIYTDHAHPVTGELSPDITVTELDAPDRLQAELFGPLSANPAQAEQQARAVIASPAFRQ
NQQALASGYAGVAHAWSLGLEKYPAVVFDDKWVVYGTTDVASARAKLDAWREKQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAX39457.1 unknown Not tested Hrp PAI Protein 2e-44 71
YpsIP31758_3702 YP_001402656.1 hypothetical protein Not tested YAPI Protein 4e-30 55
api53 CAF28527.1 hypothetical protein Not tested YAPI Protein 3e-30 55
STY4575 NP_458660.1 hypothetical protein Not tested SPI-7 Protein 8e-19 49
t4272 NP_807870.1 hypothetical protein Not tested SPI-7 Protein 8e-19 49
unnamed ABR13358.1 hypothetical protein Not tested PAGI-5 Protein 9e-11 42
EXA21 ABD94630.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-10 41
RL018 AAP84145.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-11 41