|
Name : PANA5342_3967 (PANA5342_3967) Accession : YP_005197397.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4183053 - 4184468 bp Length : 1416 bp Strand : - Note : - DNA sequence : ATGATGAATTTCAGCGTCAAAAAACGGCGCGTGGCCACGGGCGCATTATTACTTTCCCTGGCGATGCCGGCACTGGCCAT CGATACCACGCTTTCCTCACAGGGTGCCGGCGTCAGCGGCGCCATCAACGACGGGCTTTTCTACTCCATCGGCGGCGGCT CGGTGATTTCGCCGCCTTCAACCCGCAGCAACATGTCGCGCCTCGGCCTGGACGGTGGCTGGAGCAGTGATTTGATGTGC GGTAACTTCGACCTGAAAACCACGGTCGGTAACCAGCTGAATGGCATCACCAGCGGATTTAAGGACCTCATGGGCAACGT CATTCAGGGGGCGACCGGCGCGGTGATGAGCATGCCGGCGATGGCCATTCAGCGTGCCAATCCGGGTCTCTATGAAATGC TGACCAACGGCGTGCTGCAGGCGGGCCTGAACTTCGACAAGGCCCAGCTCAACTGTCAGAACATGTCGAAAAAGCTGGCC GACTACACCCTGGGCAGCAAGTGGCAGCAGGCGGCCGTGTCTGAAGAGTATAAAGACATCGTGGCATCGAGCGGCGGTGA TGCGGTATCAAGCGACCAGAAACTGCAGAAGGCCACGGGTGAAGAAGGCGTGACGTGGGTCGGTGGCCAGAAGCGCGGCG GCAAGGGACAGCCGGCGATTCAGCCCACGCGCGACCTGGCAAAAGCCGGCTACAACATGATGACCAGCCTGCCGGTGACC AGCAACAGCAGCGTGGGGTCAGCCAGCTGTAACGGTACTGTCTGCCAGCGCTATAAATCCTCCGATGAAGCCGCTGCGGC GGTAGTGAAAGTCCTCGGTGACCGCTCTATCCGAACCTGCCGTGAAACCAGCGAATGCACAAGCGGCGGCGCGGATAACC AGCCGGGCAGCACCGTTGCCGGCACCGGCTTCTCGCCGGTTCTGGAAGACGCCACCAAAACCAATCTGGAGCAGCTCAGC AAACTGGTTAACGGTCAGCTGCAGCCCACGGCCGATAATCTGGCCGCGCTCAAAACGGGCAGCCTCGTCGTCACGCGCAG CGTGATTCAGGCGCTGCGCGATGACCCTGACCGGGCCGCACTGGTGCAGCGACTTGCAGGTGAACTGGCCATGGCTGACA CGGTTGAGGCGGCACTCACCATGCGACGCATGCTGACGACAGGTGAGTCTGAGCCTAATGCGGCCGAACAGCCGGAGGCC ATCGCCGAGGGTGACCGGCGCATTGATGCCCTTGACCGCGAGCTGAACGCACTGCGCAACGAGATGGAGCTTCGCAAGTC CATCAGCAGCAACAGCCTACTCACCACGCTTGAGCGTCAGGGCGAACGTAATCAGGACAACCAGCTGCAGCAGAAAGCCG GCAATCAGGATCAGGGCTTCAGCCAGATGAACCAGCCTCAGCCGGGAGCCAGATAA Protein sequence : MMNFSVKKRRVATGALLLSLAMPALAIDTTLSSQGAGVSGAINDGLFYSIGGGSVISPPSTRSNMSRLGLDGGWSSDLMC GNFDLKTTVGNQLNGITSGFKDLMGNVIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGLNFDKAQLNCQNMSKKLA DYTLGSKWQQAAVSEEYKDIVASSGGDAVSSDQKLQKATGEEGVTWVGGQKRGGKGQPAIQPTRDLAKAGYNMMTSLPVT SNSSVGSASCNGTVCQRYKSSDEAAAAVVKVLGDRSIRTCRETSECTSGGADNQPGSTVAGTGFSPVLEDATKTNLEQLS KLVNGQLQPTADNLAALKTGSLVVTRSVIQALRDDPDRAALVQRLAGELAMADTVEAALTMRRMLTTGESEPNAAEQPEA IAEGDRRIDALDRELNALRNEMELRKSISSNSLLTTLERQGERNQDNQLQQKAGNQDQGFSQMNQPQPGAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAX39459.1 | unknown | Not tested | Hrp PAI | Protein | 5e-176 | 89 |
| api55 | CAF28529.1 | putative exported protein | Not tested | YAPI | Protein | 5e-157 | 78 |
| YpsIP31758_3700 | YP_001402654.1 | hypothetical protein | Not tested | YAPI | Protein | 4e-156 | 78 |
| YE3466 | YP_001007627.1 | hypothetical protein | Not tested | YAPI | Protein | 9e-157 | 78 |
| STY4577 | NP_458662.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-136 | 66 |
| t4274 | NP_807872.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-136 | 66 |
| PMI2572 | YP_002152291.1 | hypothetical protein | Not tested | Not named | Protein | 5e-126 | 60 |
| EXA19 | ABD94628.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 1e-70 | 43 |
| unnamed | ABR13356.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-69 | 42 |
| RL016 | AAP84143.1 | putative pathogenesis-related protein | Not tested | PAPI-1 | Protein | 2e-70 | 42 |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 7e-69 | 41 |
