Gene Information

Name : PANA5342_3965 (PANA5342_3965)
Accession : YP_005197395.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4181326 - 4182702 bp
Length : 1377 bp
Strand : -
Note : -

DNA sequence :
ATGACGGCGAACAGTTACCTGGAATACTTCCTCATCCTGTTTGGCTGGGTACTCAATAACTCGATGTGGGGCATCCTCAG
CAGCACCGGCCTGTTCGCGCTGCCGCTGGTTTTCAAGGTCCTCGGCGTGTGGCTGAAGGTGCGTGAGGAAGGGGCCGACG
AGGGTAATAAAGGTGTACTCGCGCTGCCCCGCATCGAGCACACGATTTACCTTTCCTTTCTGGTCATGCTGCTCTGCTGC
GTTCCGCTGGTGCCGGTAGATATCAGCACCATCAAGTTTGACGACGCGCGGGCGAAACAGTGCGGCTTCAGCGTACCCAC
GCCGCAGAACTCCGGCTATAAAGGGCTCGTAAATGACTTCGACGGCCGCACGGCTGAGGTGCCGGTGTGGTGGTATCTGC
TGCATATGATGTCGAAAGGCACCACGCAGGCAATGATAGCGTCCATTCCCTGCGGCACGCAGCTGCGTCAGCTGCGCTTT
GACGTGCAGAACACAAAACTGCGCGACCCGGTGGTGCTGCAGGAGGTCCAGGACTTCGCAAACCAGTGCTACTCCCGTGC
CTATTTTAAGTTAAAAAACAGCAACAGCCAGCTGAGCGACGCCACCATCAACTCGGTTGGCTGGATTGGTAGCGATTATT
TTCTTAATACCTCAGGCTATTACGACTATTACACGGCCATGACGCCACGAAACCAGTGGCCATACAGCAGCAGTCGTGAC
AGCGGCTATCCGGATACTGGACAGGGAGGGTATCCGACGTGCAAAACCTGGTGGTCAGACAGCAGCAACGGGCTGCGTAA
GCGTGTTCTGGCCAGCATCAGTGACGGCACGCGCATTGAGCTGCAGCGCCAGTTCCCGGGCAGTCAGTGGGAAGAACCGG
CCCTTCGCTGGCTGGTCAGTCCCCGCAATGCCGGGCTGTCCGGTGACGGCACAACTTATGCAATAGGCAGTGCAGATAAT
ACCAGCGGTGTAGTCGGTAACCTGACCCGACTAACGTCGACAATTGGGCTGGGTCTGAAGCAGGCCGAGGCATTGCCGGG
CTTTGATGCGCTCAAGCAGGCGCTGCCGATGATACAGGCGTTGCTACAGATGATGATCATCATCGTCATCCCCGTGCTGA
TAATGTTCAGTGCTTATGATCCAAAGACGGTTGTGACAGTTTCTTTTGCAATGTTTGCTCTTCAGTTTATTACCTTCTGG
TGGGCGCTGGCAGGGTGGCTTGATGACCGGCTTATAACCATTCTCTTCAACAATATGGCGGATCAGGGTCTCACCAGTTC
CGTTCCTTTTGCCAATTTCATGAGCTCAACCAACGACGGCTGGATCATGAACTTAGTGCTGGGGATGATGTATGTTGTTT
TCCTGCGTTTTGGGTAG

Protein sequence :
MTANSYLEYFLILFGWVLNNSMWGILSSTGLFALPLVFKVLGVWLKVREEGADEGNKGVLALPRIEHTIYLSFLVMLLCC
VPLVPVDISTIKFDDARAKQCGFSVPTPQNSGYKGLVNDFDGRTAEVPVWWYLLHMMSKGTTQAMIASIPCGTQLRQLRF
DVQNTKLRDPVVLQEVQDFANQCYSRAYFKLKNSNSQLSDATINSVGWIGSDYFLNTSGYYDYYTAMTPRNQWPYSSSRD
SGYPDTGQGGYPTCKTWWSDSSNGLRKRVLASISDGTRIELQRQFPGSQWEEPALRWLVSPRNAGLSGDGTTYAIGSADN
TSGVVGNLTRLTSTIGLGLKQAEALPGFDALKQALPMIQALLQMMIIIVIPVLIMFSAYDPKTVVTVSFAMFALQFITFW
WALAGWLDDRLITILFNNMADQGLTSSVPFANFMSSTNDGWIMNLVLGMMYVVFLRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3465 YP_001007626.1 hypothetical protein Not tested YAPI Protein 2e-160 78
YpsIP31758_3699 YP_001402653.1 hypothetical protein Not tested YAPI Protein 8e-162 78
api56 CAF28530.1 putative membrane protein Not tested YAPI Protein 3e-161 78
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 3e-88 45
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 3e-88 45
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 2e-83 45
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 2e-80 42
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-74 41