Gene Information

Name : PANA5342_3962 (PANA5342_3962)
Accession : YP_005197392.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : DNA-binding prophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4177908 - 4178807 bp
Length : 900 bp
Strand : -
Note : -

DNA sequence :
ATGTCCAGACGTGAAAAACTGTTAAAGCAGGAACTTGTCGCTGAAATCCGTAAAAGCGGAGGGAGCTTTAAAAAGCAGGA
TGACTATTCCAGAATTATGCACCGGTTTGCTGAGCGTCTCGCAGCGCTCAATATTCAGATAAACTCGGTATCACAACTCA
AAGTCCGGCACATTGAGTTGTATATGAACAGCCGGGCATCTGATGATGTTTCCCGGCGAACCCGTCAGAATGAAATGTCG
GCAATACGGGTGATGCTCCGTAATGCCGGTAAACACAAACTGGCTGACCCCTCACATGAACGACTGAATAATAAAAGTCT
GGGTATTTCAGACACGAGTCGCATGGGCACAAAAAAATCCGTTTCTGACGAGCGCTACATTGAGATTCTTCATAATATTG
AGAAAAAAAATGAAGGCGTTGCCGTGGCGGTATGTCTGTCACGTTATATCGGACTGAGAAATGAAGAAGCTATTCAGTCA
GCAAAATCGTTAAATACCTGGCTGAAAGCATTACAACGGGGCGATAAGACCCTGAAAGTTATTTTCGGAACCAAAGGGGG
ACGTGCAAGGCAGACCACCATCGTCGACAGGGATAAAGTTCTGGAGGCTGTTAACCGTGCCATTAAACACGCAGAAAAAA
ATAACGGTAAGATTATTGATAAGCCCGATTTAAAAACCGCGATGGACTATTACAGAAATACGCTCCGGACCGAAATGAAC
GGGGGGCATGAGACACCACACAGCTTACGTTACAGTTACGCGGAAGATGCTTTCAGATATCACCTTGCCAGAGGTTTTTC
GAAAGACGAATCACTTGCACTTACCTCGATGGACCTCGGACATGGTGACGGACGTGGAACCTATATCAGAAATGTTTACT
GCCAGTCCCTGATGGACTGA

Protein sequence :
MSRREKLLKQELVAEIRKSGGSFKKQDDYSRIMHRFAERLAALNIQINSVSQLKVRHIELYMNSRASDDVSRRTRQNEMS
AIRVMLRNAGKHKLADPSHERLNNKSLGISDTSRMGTKKSVSDERYIEILHNIEKKNEGVAVAVCLSRYIGLRNEEAIQS
AKSLNTWLKALQRGDKTLKVIFGTKGGRARQTTIVDRDKVLEAVNRAIKHAEKNNGKIIDKPDLKTAMDYYRNTLRTEMN
GGHETPHSLRYSYAEDAFRYHLARGFSKDESLALTSMDLGHGDGRGTYIRNVYCQSLMD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 1e-69 54
api85 CAF28559.1 putative integrase Not tested YAPI Protein 2e-46 51
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 1e-61 51
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 1e-61 51
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 2e-63 50
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 9e-51 50
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 9e-51 50
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 5e-65 49
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 2e-49 44
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 2e-49 44