Gene Information

Name : xerC1 (PANA5342_3913)
Accession : YP_005197343.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4128304 - 4129269 bp
Length : 966 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGAAAAAACGACCTTCGATGACATTCTGAACGACTATTTTTTCAGTAAGGTTCTCCGTCCAGCCAGTGAATGGAG
CTACAGAAAGGTTGTAAAAACTTTCACAGAATTCAGTGAAGGTAAAATATTGCCTGAAAGTATATGTCGCCTTGATGTTC
TTAAATGGCGACGTCACGTTTTGAACGAACAAAACTGCAGTAAACGGACATGGAATAATAAAGTTGCACATATGAGAGCG
CTGTTTAACCACGCTATAACGCACTCTCTCATTACTGCCCGGGACAATCCGTTCAATGGCGTGGTCGTTAAGCCAGACCG
TAAACGAAAGAAAACGCTTACCCGGGAACAAATGAAGAAAATTGATCTCGTAATGCATCGAAAAATTGAACAGGAGCAGA
TCGGTATTCATGATCCCCGGCCGAACGCGCTAGAACCCGCATGGTTCTGGATGACAGTGATTGAAACGCTAAAGTTTACG
GGCATGCGTCAGAACCAGCTGCTGCATATAAGGCTGTGCGATGTTGATCTTAAACAGGGTGTTATTGAGCTGAGACCTGA
AGGCTCAAAAAATCATCGTGAACACCGGGTGCCTGTCACTGACAAGCTGAGGCCTCGCCTTGAAGATCTGTACCGTCAGG
CTAAACAAATGGGCGCAAGGCCGAAGGATCAACTGTTTAATATCAACCGTTTCAGTCGCTTAAAAAAGAAAAACGTCATG
GGCGGTAACATGGATCACCCCCCAATGCGGGCGTTTTTCAGGCGGCTTTCACGTGAGTGTCAGTGTGATGTCAGCCCGCA
CCGTTTCAGGCATACCATCGCTACAGATCTGATGAAAACACCGGAACGAAGCCTGAATGACGTGAAAATGTTGCTGGGGC
ATTCAAGTGTTGCGGTCACTCTGGAATATGTTGAAGCGAATATGGATCATCTTCGAAGAAATCTGGAAAGCGTATTTATG
CTCTAG

Protein sequence :
MSEKTTFDDILNDYFFSKVLRPASEWSYRKVVKTFTEFSEGKILPESICRLDVLKWRRHVLNEQNCSKRTWNNKVAHMRA
LFNHAITHSLITARDNPFNGVVVKPDRKRKKTLTREQMKKIDLVMHRKIEQEQIGIHDPRPNALEPAWFWMTVIETLKFT
GMRQNQLLHIRLCDVDLKQGVIELRPEGSKNHREHRVPVTDKLRPRLEDLYRQAKQMGARPKDQLFNINRFSRLKKKNVM
GGNMDHPPMRAFFRRLSRECQCDVSPHRFRHTIATDLMKTPERSLNDVKMLLGHSSVAVTLEYVEANMDHLRRNLESVFM
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3686 YP_001402640.1 phage integrase Not tested YAPI Protein 5e-98 60
api95 CAF28569.1 putative phage integrase Not tested YAPI Protein 1e-98 60
YE3450 YP_001007614.1 phage integrase Not tested YAPI Protein 5e-96 59
STY4666 NP_458745.1 probable phage integrase Not tested SPI-7 Protein 9e-74 52
t4357 NP_807950.1 phage integrase Not tested SPI-7 Protein 9e-74 52