|
Name : kdsD (PANA5342_3870) Accession : YP_005197300.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : - COG ID : - EC number : - Position : 4088510 - 4089496 bp Length : 987 bp Strand : + Note : - DNA sequence : ATGTCATATCAGCAACCAACGGTAAATTTTGATTTTCAGAAAGCCGGTAAAACGGTATTACGCATCGAGCGCGAAGGCCT GGAGCAGCTTGATCAATATATTAATGAGGCTTTCGCCGACGCCTGCGCACTGATTTATGCCTGTCAGGGAAAAGTGGTGG TCATGGGAATGGGCAAGTCGGGCCATATCGGGAAAAAAATGGCGGCCACCTTTGCCAGCACCGGCACGCCGGCGTTCTTT GTGCATCCCGCTGAAGCCAGCCATGGCGATCTTGGCATGGTAGGTAAAGACGATGTCGTCATCGCGATATCTAACAGTGG CGAATCCAGTGAGATTTTGGCACTGATACCGGTAATGAAACGCCAAAAGATTCCGTTGATCTGTATGACAAGCCGTCCTG AAAGCGCCATGGCCCGCGCCGCAGATATCCACCTGTGCGTGAAAGTCCCACAGGAGGCCTGTCCGCTCGGCCTGGCCCCC ACCACCAGCACAACCGCAACGCTGGTCATGGGCGATGCGCTGGCCGTTTCCCTGCTGGAAGCCCGCGGCTTTACGCCAGA AGACTTTGCCTTGTCCCATCCGGGCGGTGCGCTGGGCCGGAAGCTGCTGCTACACGTCAGCGACATTATGCACAGCGGGG ATGAACTCCCGCACGTCACTCGCGATGCTTCCCTGCGTGATGCCCTGCTGGAAATCACCCGTAAAAATCTTGGCCTGACG GTTATCGTGGACGATCTGATGAAGATCGAGGGCATCTTTACCGATGGTGACCTGCGCCGCATCTTTGATATGGGCATTGA TTTTCAACACGCCACTATCGCTGAAGTCATGACCCGGGGTGGCATTCGCGTGCGGCCTAACGTGCTGGCGGTGGATGCGC TGAATTTGATGCAAACCAAAAACATTACTTCCCTGCTGGTGGCCGATGACGACCGTCTGTTGGGTGTGGTACATATGCAT GACATGCTGCGCGCTGGCGTAGTGTAA Protein sequence : MSYQQPTVNFDFQKAGKTVLRIEREGLEQLDQYINEAFADACALIYACQGKVVVMGMGKSGHIGKKMAATFASTGTPAFF VHPAEASHGDLGMVGKDDVVIAISNSGESSEILALIPVMKRQKIPLICMTSRPESAMARAADIHLCVKVPQEACPLGLAP TTSTTATLVMGDALAVSLLEARGFTPEDFALSHPGGALGRKLLLHVSDIMHSGDELPHVTRDASLRDALLEITRKNLGLT VIVDDLMKIEGIFTDGDLRRIFDMGIDFQHATIAEVMTRGGIRVRPNVLAVDALNLMQTKNITSLLVADDDRLLGVVHMH DMLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-47 | 42 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-47 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-47 | 42 |
