Gene Information

Name : PANA5342_3798 (PANA5342_3798)
Accession : YP_005197228.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4008883 - 4009638 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGAAGAAAATTTTACTGGTCGGGGAATCCTGGACCAGCACGTCCGTTCACGTTAAAGGCTTCGATCAGTTTGCCAC
CGCCACCTGGCACAATGGGGCAACCGACTTTATGGCGGCGCTGGCCGACAGCGACTATGCCATCACCTATATGCCCGCGC
ACGCGGCGGCGACCGAATTTCCGCTGACGCTGGCCGGGCTGCAAGCGTGGGACGCGATCATTCTGTCGGATATCGGCGCG
AACACGTTACTGCTGCATCCGGACACCTGGCTGAAGAGCCAGCGCACGGCGAACCGTCTGACGCTGATCCACGACTATGT
GGCGGCGGGCGGTGCCTTGATGATGATCGGCGGCTACTTCAGTTTTCAGGGCATCAACGGCGGCGCGCGCTATCGCAACA
CGGCGGTCGAGAAAGTGCTGCCGGTACGCTGCCTGGCCTGGGACGACCGCATCGAAACGCCCGAAGGTTCTTATCCGAGC
GTCACCGAATCCCACACGCTGTTTACCGACATGCCCGACGAATGGCCGTGGTTACTGGGCTATAACGAAGTGGAAATGCA
CCCTGAAGGCAAACTGCTGGCAACCATTGCCGGCACCGCGCATCCGTTGCTGGCGGTGCGCGAATATCAGCAGGGCCGCT
CGTTGGTATGGACCAGCGATATGTCTGCCCACTGGTTGCCGCAGGAATTTGCCCAGTGGCAGGGTTATCGCCAGCTGTGG
ATCAACTGTCTTGACTGGTTAACGGTTCGTCACTGA

Protein sequence : 
MQKKILLVGESWTSTSVHVKGFDQFATATWHNGATDFMAALADSDYAITYMPAHAAATEFPLTLAGLQAWDAIILSDIGA
NTLLLHPDTWLKSQRTANRLTLIHDYVAAGGALMMIGGYFSFQGINGGARYRNTAVEKVLPVRCLAWDDRIETPEGSYPS
VTESHTLFTDMPDEWPWLLGYNEVEMHPEGKLLATIAGTAHPLLAVREYQQGRSLVWTSDMSAHWLPQEFAQWQGYRQLW
INCLDWLTVRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 5e-45 43
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 5e-45 43
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 5e-45 43
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 5e-45 43
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 4e-45 43
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PANA5342_3798 YP_005197228.1 hypothetical protein VFG0482 Protein 2e-45 43