Gene Information

Name : rbsK9 (PANA5342_3751)
Accession : YP_005197181.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : ribokinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3950255 - 3951454 bp
Length : 1200 bp
Strand : -
Note : -

DNA sequence :
ATGATGTTTCTGGAAGAACGACGCAATCAAATTTTGCAATGGCTGGACGAACATGAACGCGTCACCGTTAACGGGCTGGC
GAGCCAGTTGCGTGTTACTCGGGAGACGATTCGCACCGATCTGCGTGCGCTGGCAGAGCAGGGGCTGGTTCAGCGCTGCT
ACGGCGGTGCCATAGTGCAACGCCGTAATCTGCAGGAAAAGCTCATCAGCGAAAGTGGCCATTTTGATGTTTTACTCAAG
CGGTTGCAGGCGCGTAAAACCACCGTAAAGACCACCAGCAGGCAGGGAAAAGTCTGCATCTTTGGCGCATTCAATGTTGA
TATCGTCGCCAGGGTGGCGCGTTTTCCGCAAAGTGGTGAATCGCTGATGGCGCAAGGCTGCACACTCGGGCCCGGCGGCA
AGGGGGCCAATCAGGCCATGGCCGCCAGCCGGGCCGGAGCGCGCGTCCATTTTGTTGCCAAGGTCGGAACCGATCGGTTC
AGCCAGTTTGCGTTTGATCACCTTTCGTCATCGGACATTCACTCTTTCCGTTTATACCAGACGGATACCGAACCCACAGG
CAGCGCCATCATTTATGTCTCGCAGGAAAACGGCGAGAACATGATTGCCATCTACCCCGGTGCCAATAAAACCCTGACGG
ATGCCGAAATTGCCGAGCTGACCCATGAACTCACCGATGCGGATGTGTTGTTACTGCAGCTGGAAAACAACGTCGAGGCC
ACGCGCAGCGCTATCCGGCTGGCACACGCACTGGGCGTCCGCATCATCATGAACCCGGCGCCGTTCTCGTCTGAGGTCGT
GAACGTTCTGCCGATGATCGATGTGCTGACGCCCAACGAAACCGAGGCCTCGCGGCTCTCGGGCATTGAAATCTGTGACA
TGGCGAGTGCGCGTAAGGCGGCGCAGGCGATTGTGGCGCAGGGGGCGCAGCGAGTGATCATCACCATGGGCGCGCGCGGC
GCGCTGCTGTTCGACGCGCCGCATTGTCACGTCATTCCCGCCTTTCCTGCGCTCAGCGTGGACACCACCGGCGCGGGCGA
TGCCTTTAACGGCGCGCTGGCCGCCGCGCTGGCGCAGGGGCAGCCGTTACTGCAGGCCGCCACATGGGCATCGGCCTTTG
CGTCCCTGGCCGTAGAGCGGGAAGGCGCAAGCAATATGCCCAAGCGGCATCAGGTCATCACCCGACTTAACCAACGATAA

Protein sequence :
MMFLEERRNQILQWLDEHERVTVNGLASQLRVTRETIRTDLRALAEQGLVQRCYGGAIVQRRNLQEKLISESGHFDVLLK
RLQARKTTVKTTSRQGKVCIFGAFNVDIVARVARFPQSGESLMAQGCTLGPGGKGANQAMAASRAGARVHFVAKVGTDRF
SQFAFDHLSSSDIHSFRLYQTDTEPTGSAIIYVSQENGENMIAIYPGANKTLTDAEIAELTHELTDADVLLLQLENNVEA
TRSAIRLAHALGVRIIMNPAPFSSEVVNVLPMIDVLTPNETEASRLSGIEICDMASARKAAQAIVAQGAQRVIITMGARG
ALLFDAPHCHVIPAFPALSVDTTGAGDAFNGALAAALAQGQPLLQAATWASAFASLAVEREGASNMPKRHQVITRLNQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 4e-66 50
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 3e-66 50
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 1e-66 50
APECO1_1076 YP_853096.1 carbohydrate kinase Not tested PAI IV APEC-O1 Protein 5e-60 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rbsK9 YP_005197181.1 ribokinase VFG0483 Protein 2e-66 50