Gene Information

Name : rbkS (PANA5342_3683)
Accession : YP_005197113.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : sugar kinase, ribokinase family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3871782 - 3872699 bp
Length : 918 bp
Strand : -
Note : -

DNA sequence :
ATGGATATCGCCGTTATTGGTTCAAACATGGTGGATTTAATCACCTATACCAACAGCTTTCCTAAAGCTGGAGAGACGCT
TGAGGCACCCGATTTTGCGATTGGCTGTGGGGGAAAAGGGGCCAATCAGGCTGTGGCGGCAGCAAAACTGGGTGGCGAGG
TGATGCTGGTCAGTAAAGTCGGCGATGACCTGTTTGCGCCCACCACGTTGGCTAATTTGCAACAGCAGGGCGTGGATACG
CGTTATGTCACAACCGAAAAAGGGGTTTCCAGCGGCGTGGCCCCCATTTTTGTTGATGATCAGTCGCAAAACCGCATTTT
AATTATCAAAGGCGCGAATCAGCACCTCAAGCCGGCGGATATTGATGCTGCGGGTGATGCGTTGAAACGCTGTCGGTTGA
TCATTCTTCAGCTCGAAATTCCGCTGGAAACGGTGTACTACGCTATCGATTTTGCCCGTCAGCATGATATTCGCGTCATC
CTCAACCCTGCGCCCGCCGTGGCAGACCTGGATATCCGCTATGCCTGCCAGTGCGACTTTTTTATGCCCAATGAGACGGA
GCTGGAAATTCTTACCGGGATGCCGGTGGGGACGGATGATGACGTCAGGCTGGCCGGTGCGTCCTTGCTGAAACGTGGCC
TGAAAAACCTGATCGTTACGCTGGGCAGTCGCGGATCGTTGTGGATGACCGGAGAGACACAGCACCAGGTTGCGCCTGTG
CCGGTTAAGGCAGTGGATACCAGCGGTGCCGGTGATGCGTTTATCGGCTGCTTCGCTCATGAACTGGTGAAAACGGGCGA
TATTCCTGCGGCGATGGCCAAAGCCTCCGCCTACGCGGCCTGTAGCGTGACGGCGCGCGGCACACAACGTTCTTATCCTG
ATACAGCGGAATTTCAGCGCTTTCTTGACCTTCAGTGA

Protein sequence :
MDIAVIGSNMVDLITYTNSFPKAGETLEAPDFAIGCGGKGANQAVAAAKLGGEVMLVSKVGDDLFAPTTLANLQQQGVDT
RYVTTEKGVSSGVAPIFVDDQSQNRILIIKGANQHLKPADIDAAGDALKRCRLIILQLEIPLETVYYAIDFARQHDIRVI
LNPAPAVADLDIRYACQCDFFMPNETELEILTGMPVGTDDDVRLAGASLLKRGLKNLIVTLGSRGSLWMTGETQHQVAPV
PVKAVDTSGAGDAFIGCFAHELVKTGDIPAAMAKASAYAACSVTARGTQRSYPDTAEFQRFLDLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoK ADD91722.1 deoxyribokinase DeoK Not tested PAI-I AL862 Protein 5e-88 63
unnamed CAE85173.1 hypothetical protein Not tested PAI V 536 Protein 6e-88 63
ORF4 AAK27331.1 unknown Not tested PAI-I AL862 Protein 2e-81 60