Gene Information

Name : PANA5342_0360 (PANA5342_0360)
Accession : YP_005193790.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : transcriptional accessory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 396735 - 399059 bp
Length : 2325 bp
Strand : -
Note : -

DNA sequence :
ATGATGAATGTTCTTAGCCAGCTAATTGCAAGTGAGCTACAGGCGCGCCCTGAGCAAGTAGATGCGGCCGTCCGCCTGTT
GGATGAAGGGAATACCGTGCCGTTTATCGCACGTTATCGTAAAGAGGTGACGGGCGGCCTGGATGATACACAACTCCGCC
AGCTCGAAACCCGCCTCAGCTACCTGCGTGAATTATCCGAGCGTCGGCAGGCCATCCTGAAATCTATAGAGGAACAGGGA
AAACTCACCGACGATCTGGCGAATGCCATCAATACCACCCTCAGCAAAACCGAACTTGAAGACCTCTACCTGCCCTATAA
GCCTAAGCGCCGTACGCGTGGCCAAATCGCGATTGAAGCCGGGCTGGAACCCCTGGCCGATACCTTATGGCAGGATCCTT
CACAGGACCCTGAGCAGTTGGCAACAGGCTATGTGAATGTGGATAACGGTGTCGCTGACGTTCGTGCGGCGCTGGATGGC
GCGCGTTATATCCTGATGGAGCGCTTTGCTGAAGATGCCGCCCTGCTGGCTAAAGTCCGCCACTATTTGTGGAAAAATGC
CCATCTGGTCTCAAACGTGGTGGAAGGCAAAGAGGAAGAAGGCGCGAAATTCCGCGACTACTTCGATCACCATGAGCCGC
TGCACAGCGTCCCTTCGCATCGCGCGCTGGCCATGCTGCGCGGTCGTAATGAAGGTATTTTACAGCTGTCGCTGAATGCC
GATCCGCAGTTTGATGAGCCACCGCGCGAAAGCCACGGTGAAACCCTGATTGCGGAACACCTGAATCTGCGACTGAATAA
CGCACCGGCTGACAGCTGGCGCAAGGCCGTGGTCAGTTGGACCTGGCGCATCAAAGTCATGCTGCATCTGGAAACCGAGC
TGATGGGTACCGTTCGCGAGCGTGCGGAAGACGAGGCCATTAACGTCTTTGCCCGTAACCTGCACGACCTGTTAATGGCG
GCACCTGCGGGCATGAGGGCCACGATGGGCCTGGATCCCGGCCTGCGTACCGGTGTGAAAGTTGCCGTGGTTGACGCGAC
CGGCAAGCTGGTCGCCACCGATACAGTTTATCCGCATACCGGGCAAACGGCCAAGGCGGCGGCGGCGGTCGCGGCGCTGT
GCGTGAAACATCAGGTGGAACTGGTCGCCATCGGTAATGGCACCGCCTCACGTGAAACCGAGCGCTTCTTTCTGGATCTG
CAAAAACAGTTTCCCCAGGTCACCGCCCAGAAAGTGATCGTCAGCGAAGCGGGCGCCTCAGTCTACTCCGCGTCTGAATT
AGCTGCGCTGGAATTTCCGGATCTGGATGTCTCACTGCGTGGCGCAGTGTCGATCGCCCGTCGCCTGCAGGATCCGCTGG
CCGAACTGGTGAAAATCGATCCGAAATCGATCGGTGTCGGCCAGTATCAGCATGACGTCAGCCAGAGCCAGCTAGCAAAA
AAACTGGATGCGGTGGTGGAAGACTGTGTGAACGCTGTCGGTGTCGATCTCAACACGGCTTCGGTACCGCTGCTGACGCG
CGTGGCCGGGTTAACCCGCATGATGGCACAAAATATTGTTGGCTGGCGCGATGAAAACGGCCGTTTCCAGAACCGTCAGC
AGCTTCTCAAGGTCAGCCGTCTTGGGCCTAAAGCGTTTGAGCAGTGCGCTGGCTTCCTGCGCATCAACCACGGCGATAAT
CCACTGGATGCCTCGACGGTGCACCCGGAAGCTTATCCGGTGGTGGAACGCATTCTGGCCGCGACCGAGCAGGCGCTGAG
TGAGCTGATGGGCAATCCCACCAGCCTGCGTAACCTGAAAGCGTTGGACTTCACAGACGACCGCTTTGGTTTACCGACTG
TGACCGACATCATGAAAGAGCTGGAAAAGCCGGGCCGCGATCCCCGTCCTGAGTTTAAAACGGCACAGTTTGCCGAAGGC
GTGGAAACCCTGAATGACCTGATGCCAGGCATGGTACTTGAAGGCGCCGTGACCAACGTCACCAACTTTGGTGCGTTCGT
CGATATTGGCGTGCATCAGGATGGCCTGGTTCATATTTCTTCGCTGTCGGACAAGTTTGTGGAAGATCCTCATCAGGTCG
TAAAAGCGGGCGACATCGTTAAAGTTAAAGTGATGGAAGTGGATCTACAACGTAAGCGCATTGCCTTAACCATGCGCCTT
GACGAGCAGCCGGGAGAAGGCAACGCGCGCGGCGCTAAGAGCGGTGCGCCACGCGAAGAAAAACGTCCGGCCGCGAACAA
AGGCCGCGCACGTCCTGCCAGCCAGCCCGCAGGCAACAGCGCCATGGGCGACGCGCTGGCGGCGGCATTCGGTAAAAAAC
GCTAG

Protein sequence :
MMNVLSQLIASELQARPEQVDAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLSYLRELSERRQAILKSIEEQG
KLTDDLANAINTTLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADTLWQDPSQDPEQLATGYVNVDNGVADVRAALDG
ARYILMERFAEDAALLAKVRHYLWKNAHLVSNVVEGKEEEGAKFRDYFDHHEPLHSVPSHRALAMLRGRNEGILQLSLNA
DPQFDEPPRESHGETLIAEHLNLRLNNAPADSWRKAVVSWTWRIKVMLHLETELMGTVRERAEDEAINVFARNLHDLLMA
APAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTVYPHTGQTAKAAAAVAALCVKHQVELVAIGNGTASRETERFFLDL
QKQFPQVTAQKVIVSEAGASVYSASELAALEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVGWRDENGRFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDN
PLDASTVHPEAYPVVERILAATEQALSELMGNPTSLRNLKALDFTDDRFGLPTVTDIMKELEKPGRDPRPEFKTAQFAEG
VETLNDLMPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKAGDIVKVKVMEVDLQRKRIALTMRL
DEQPGEGNARGAKSGAPREEKRPAANKGRARPASQPAGNSAMGDALAAAFGKKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62