Gene Information

Name : rdgC (PANA5342_3355)
Accession : YP_005196785.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : putative exonuclease RdgC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3502125 - 3503036 bp
Length : 912 bp
Strand : +
Note : -

DNA sequence :
ATGTTGTGGTTTAAAAATATGATGGTTTATCGTCTGAATCGTGACATTCCGTTGTCCGCAGACGACATGGAAAAACAGCT
GGAGGCTTTCACCTTCTCGCCCTGCGGCAGTCAGGACATGAGCAAGACCGGGTGGGTGGCACCGATGGGCAATCGCAGCG
ATGCCCTGACCCACGTCAACAACGGTCAGATTGTCATTTGCGCGCGCAAAGAAGAAAAAATCCTGCCCTCTCCGGTCGTG
AAGCAGGCGCTGGAGGCAAAAATCGACAAGCTTGAGGCAGAGCAGAGCCGCAAGCTAAAAAAGACGGAAAAAGATTCGCT
GAAAGATGAAGTGCTGCACAGCCTTTTACCGCGTGCGTTCAGCCGTTTCAGTCAGACCTATATGTGGATCGACACCGTGA
ACAACCTGATCATGGTGGACTGCGCCAGCGCTAAAAAAGCCGAAGACACGCTGGCTCTGCTGCGTAAAAGCCTGGGTTCG
CTGCCAGTTGTGCCCCTGACGCTGGAAAGTCCGATTGAACTTACCCTGACCGAATGGGTGCGTTCCGGGGATGTTCCGGC
CGGTTTTGCCCTCATGGACGAAGCCGAGCTCAAGGCCATTCTGGAAGATGGCGGCGTGATTCGCTGCAAGAAACAGGATC
TGGTGTGCGATGAAATTGCCAACCATATCGAAGCCGGTAAGCTGGTGACCAAGCTGGCGCTGGACTGGCAGGAGCGTATT
CAGTTCGTATTATCCGACGACGGCTCGGTGAAACGCCTGAAGTTCAGCGATACGCTGCGTGACCAGAATGATGATATCGA
TCGGGAAGATTTTGCGCAGCGTTTTGATGCAGACTTTATTCTGATGACCAGCGAACTGGCGGCCCTGACCAGCAATCTGG
TTGAAGCGTTAGGTGGCGAAGCTCAGCGTTAA

Protein sequence :
MLWFKNMMVYRLNRDIPLSADDMEKQLEAFTFSPCGSQDMSKTGWVAPMGNRSDALTHVNNGQIVICARKEEKILPSPVV
KQALEAKIDKLEAEQSRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTYMWIDTVNNLIMVDCASAKKAEDTLALLRKSLGS
LPVVPLTLESPIELTLTEWVRSGDVPAGFALMDEAELKAILEDGGVIRCKKQDLVCDEIANHIEAGKLVTKLALDWQERI
QFVLSDDGSVKRLKFSDTLRDQNDDIDREDFAQRFDADFILMTSELAALTSNLVEALGGEAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 2e-95 62