Gene Information

Name : ribD3 (PANA5342_3331)
Accession : YP_005196761.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3476696 - 3477799 bp
Length : 1104 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGATGAACGCTATATGGCGCGCGCGCTGGAGTTGGCGCGCCGCGGCCGTTTTACCACCACACCCAATCCCAATGT
AGGCTGCGTCATTGTGCGTGACGGTCAGATTGTTGGGGAAGGCTGGCATCAGCGCGCCGGGGAACCGCATGCGGAAGTGC
ACGCGTTACGTATGGCGGGGGACCGCGCACGTGGCGCAACCGCCTATGTGACGCTGGAACCCTGCAGTCACCACGGGCGC
ACGCCGCCCTGTTGTGATGCATTAATTGCCGCAGGTGTAACCCGCGTGGTGGCGGCCATGCAGGATCCCAATCCGCAGGT
AGCCGGACGGGGATTACACCGCCTGCATCAGGCGGGCATTGAGGTCAGCCACGGGCTGATGATGCAGGAAGCGGAAGCCC
TGAACCGTGGTTTTCTGAAACGCATGCGTACCGGCTTTCCCTGGATACAGTTAAAACTGGGTGCCTCGCTGGACGGCCGC
ACCGCCATGGCAAGTGGGGAAAGCCAGTGGATCACCTCGCCGGCGGCCCGGCGCGACGTGCAGCGGCTGCGCGCCCAGAG
TTCCGCCATCCTCAGCAGCAGTGCAACCGTACTGGCGGATAATCCCTCGTTAACGGTGCGCTGGTCAGAACTGGACAGCG
AAAGTCAGCGCCTGGTGGATGAAGCCGAGCTGCGTCAGCCGGTGAGAGTGATCGTCGATAGCCAGAATCGCGTAACGCCG
GACCACAAACTTATTGAACAATTAGGCGAAACCTGGCTGATGCGCCAGCAGGTCGACGATCGGCACTGGCCGGAAACGGT
GACGCAGATTCCTGTTCCACTGCGCGACAGCCAGCTGGATTTAGTGGCGCTGATGATGGTGCTGGGCCAGCGGCAGATTA
ACAGCGTCTGGGTGGAAGCCGGTGCGACGCTCGCGGGCGCGCTCATTCAGGCCGGGCTGGTGGATGAGCTGATTGTGTAT
GTTGCGCCGAAATTACTGGGCAATGACGCGCGTGGCCTGTGCCAGCTTGCGGGGTTAACGCAGTTGGCCGATGCGCCGGT
CTTTGCCTTTCGCGATATCCGTCAGGTCGGCGATGATGTGCGCCTGACGCTGACACCGCAATAA

Protein sequence : 
MTDERYMARALELARRGRFTTTPNPNVGCVIVRDGQIVGEGWHQRAGEPHAEVHALRMAGDRARGATAYVTLEPCSHHGR
TPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLHRLHQAGIEVSHGLMMQEAEALNRGFLKRMRTGFPWIQLKLGASLDGR
TAMASGESQWITSPAARRDVQRLRAQSSAILSSSATVLADNPSLTVRWSELDSESQRLVDEAELRQPVRVIVDSQNRVTP
DHKLIEQLGETWLMRQQVDDRHWPETVTQIPVPLRDSQLDLVALMMVLGQRQINSVWVEAGATLAGALIQAGLVDELIVY
VAPKLLGNDARGLCQLAGLTQLADAPVFAFRDIRQVGDDVRLTLTPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-68 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-68 49