Gene Information

Name : ybbA (PANA5342_3247)
Accession : YP_005196677.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3396411 - 3397097 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGCCAGCGGAAAACATTCTTGAAGTTCATCATCTTACTAAGTCCGTGGGTCAGGGAGAGCATCAGTTAACCATCCTTAC
CGGAGTTGAGTTAGTTGTCAAACCAGCTGAAACAATCGCCCTGATTGGCGAGTCAGGATCGGGTAAATCCACGCTGTTGG
GGATTCTGGCCGGTCTGGATGACGGCAGCCAGGGGGAGGTGCATCTGCTGGGCCAGCCTTTGCATCAGATGAATGAAGAG
CAGCGGGCGGCCTTACGTGCGCAGCAGGTAGGATTCGTGTTCCAGTCTTTTATGCTGGTGCCAACGTTAAATGCGCTGGA
AAATGTTCAGTTGCCTGCACTGCTGCGCGGTGAGAGCGACCGTCAGAGCCGTGACCAGGCACGGGAGCTGCTCACGCAGT
TAGGCCTGGGTGAGCGTTTGCTGCATCTGCCCGCGCAGTTATCCGGTGGTGAGCAGCAACGCGTCGCGCTTGCCCGGGCC
TTCAGCGGTCGTCCGGGCCTGCTGTTCGCCGATGAGCCCACGGGGAATCTGGATCGTAAAACCGGCGAGCGTATTGTCGA
TCTGCTGTTTTCCCTCAACCGCGATTTTGCCACGACGTTAATTCTGGTTACCCATGACGAGCAACTGGCGGCGCGCTGTA
ACCGACGCTTGCGTCTGCGTGACGGCAAACTGTGGGAGGAGCAATGA

Protein sequence : 
MPAENILEVHHLTKSVGQGEHQLTILTGVELVVKPAETIALIGESGSGKSTLLGILAGLDDGSQGEVHLLGQPLHQMNEE
QRAALRAQQVGFVFQSFMLVPTLNALENVQLPALLRGESDRQSRDQARELLTQLGLGERLLHLPAQLSGGEQQRVALARA
FSGRPGLLFADEPTGNLDRKTGERIVDLLFSLNRDFATTLILVTHDEQLAARCNRRLRLRDGKLWEEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_005196677.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-25 46
ybbA YP_005196677.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-33 45
ybbA YP_005196677.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-29 42