Gene Information

Name : ybgA (PANA5342_3130)
Accession : YP_005196560.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3271392 - 3272351 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGAGAAAATTCCGGTTGGAATCAGCGCTTGTCTGCTTGGTGAGAGCGTCAGATTTGATGGCGGCCATAAGCGCCT
GGCTTTCGCTACTGATCAACTCACCCCTTTTGTACGTTTTGAACCTGTCTGCCCCGAAATGGCGATTGGCCTTCCTACGC
CTCGCCCGGCCTTACGCCTCGTTAAAATGGGCGATGATGATGCTCTGCACCTGTGTTTCAGTAAAGAGGGCGGAGAGGAC
ATCACCGATAAAATGCGCGACTGGTCCGAAAACCGCGTTAAATCCCTTCATCATCTCTGTGGCTACATCCTGTGTGCAAA
ATCACCCAGCTGCGGCATGGAACGGGTCAGGATTTATGAACCCGCCACCAACAATAACCGCAAAGCAGGCACCGGCATTT
TTACCGCCTTTTTGCAGCGTGAAATGCCCTGGCTACCGCTTGAAGAAGATGGTCGCCTTAACGATCCCACCCTGCGCGAA
AATTTTATTGGCCGGATTTGTGCCCTGCATGAGTTTAATCAGATGTGGAAACAGGGCCTGACTCGTCACAACCTGATGGC
TTTTCACAGCCGCTACAAGCTGCTGCTGTTGGCGCATTCCCAGAAGAAATACCGTGAGCTGGGGCCGTTTGTTGCCTCAA
TGAACCAGTGGGAATCGTTGGAGGCTTTTGCCTTTGAATACCGCAGCCGACTGATGGATTTGATGTCACAGCCCGCGTCC
CGCACGAATCACACTAACGTTTTGATGCACGTTCAGGGTTATTTCCGTAGTCAGTTAAGCTCTCCTCAGCGTAAAGAGCT
GACGTCGCTGATTGACTGCTACCGGCAGGGAACGCAACCGCTGTTAGCACCCATTACGATTCTTAAGCACTATATGGCGG
AATATCCGCACCCCTGGCTGACACAGCAGCGTTACTTCGATCCTTACCCCGAAGCCCTGCGCCTGCGATACGGACAATGA

Protein sequence : 
MSEKIPVGISACLLGESVRFDGGHKRLAFATDQLTPFVRFEPVCPEMAIGLPTPRPALRLVKMGDDDALHLCFSKEGGED
ITDKMRDWSENRVKSLHHLCGYILCAKSPSCGMERVRIYEPATNNNRKAGTGIFTAFLQREMPWLPLEEDGRLNDPTLRE
NFIGRICALHEFNQMWKQGLTRHNLMAFHSRYKLLLLAHSQKKYRELGPFVASMNQWESLEAFAFEYRSRLMDLMSQPAS
RTNHTNVLMHVQGYFRSQLSSPQRKELTSLIDCYRQGTQPLLAPITILKHYMAEYPHPWLTQQRYFDPYPEALRLRYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 3e-91 57
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-91 57
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 4e-91 57
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 3e-91 57
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 3e-91 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybgA YP_005196560.1 hypothetical protein VFG0490 Protein 1e-91 57